RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ATP2A3Q93084 1043 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 NOP14P78316 857 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 TMEM57Q8N5G2 664 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 EIF3CLB5ME19 914 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 SFPQP23246 707 aaKnown RBP eCLIP3.88□□□□□ -1.79
NEB-201ENST00000172853 HOXD10P28358 340 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 BCAP29Q9UHQ4 241 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 ZNF263O14978 683 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 ZC3H15Q8WU90 426 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 CCDC85AQ96PX6 553 aaPredicted RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 KIF9Q9HAQ2 790 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 YWHAEP62258 255 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 TICAM2Q86XR7 235 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 AGTPBP1Q9UPW5 1226 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 WDR33Q9C0J8 1336 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 POTEB2H3BUK9 544 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 CEP120Q8N960 986 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 TRIM45Q9H8W5 580 aaPredicted RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 TEX14Q8IWB6 1497 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 SRGAP2BP0DMP2 458 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 OSBPP22059 807 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 PRPF6O94906 941 aaKnown RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 SMTNP53814 917 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 MVPQ14764 893 aaKnown RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 BAG5Q9UL15 447 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 LGSNQ5TDP6 509 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 LARP1BQ659C4 914 aaKnown RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 ANAPC5Q9UJX4 755 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 ATF7P17544 494 aaPredicted RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 UBA7P41226 1012 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 AMOTQ4VCS5 1084 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 RYBPQ8N488 228 aaPredicted RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 PDCL2Q8N4E4 241 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 PDRG1Q9NUG6 133 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 PPP1R9AQ9ULJ8 1098 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 TSPOAP1O95153 1857 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 TAOK1Q7L7X3 1001 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 HS2ST1Q7LGA3 356 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 CC2D2AQ9P2K1 1620 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 KIF2AO00139 706 aaPredicted RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 DIXDC1Q155Q3 683 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 AP5M1Q9H0R1 490 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 SLC12A6Q9UHW9 1150 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 PSMA3P25788 255 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 M0R2C6 588 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 METTL23Q86XA0 190 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 EXOC1Q9NV70 894 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 PTPREP23469 700 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 CACNA2D3Q8IZS8 1091 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 UBXN8O00124 270 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 NIM1KQ8IY84 436 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 SKA2Q8WVK7 121 aaPredicted RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 TFIP11Q9UBB9 837 aaKnown RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 CIB2O75838 187 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 TSPY1Q01534 308 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 KIAA1841Q6NSI8 718 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 PDZD4Q76G19 769 aaPredicted RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 WDR66Q8TBY9 1149 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 GCC1Q96CN9 775 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 AMOTL2Q9Y2J4 779 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 RIC8AQ9NPQ8 531 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 SLC13A4Q9UKG4 626 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 C10orf67Q8IYJ2 551 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 RPS6KC1Q96S38 1066 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 CCDC68Q9H2F9 335 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 XPOTO43592 962 aaKnown RBP3.87□□□□□ -1.79
NEB-201ENST00000172853 HS6ST3Q8IZP7 471 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 TMEM259Q4ZIN3 620 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 TPTE2Q6XPS3 522 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 CADPS2Q86UW7 1296 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 VCXQ9H320 206 aa3.87□□□□□ -1.79
NEB-201ENST00000172853 FIBPO43427 364 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 RRP9O43818 475 aaKnown RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 NOLC1Q14978 699 aaKnown RBP eCLIP3.86□□□□□ -1.79
NEB-201ENST00000172853 PAIP2Q9BPZ3 127 aaKnown RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 SERTAD1Q9UHV2 236 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 HSPA8P11142 646 aaKnown RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 YARSP54577 528 aaKnown RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 SETDB1Q15047 1291 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 PRR16Q569H4 304 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 TEKT1Q969V4 418 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 PIDD1Q9HB75 910 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 MAST3O60307 1309 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 PICALMQ13492 652 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 RBBP5Q15291 538 aaKnown RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 ARMC9Q7Z3E5 817 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 CNNM3Q8NE01 707 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 ZC3H6P61129 1189 aaKnown RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 TADA2BQ86TJ2 420 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 KIF28PB7ZC32 967 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 RPL13P26373 211 aaKnown RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 GJC1P36383 396 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 PPP1R21Q6ZMI0 780 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 MMTAG2Q9BU76 263 aaKnown RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 CLUL1Q15846 466 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 TWISTNBQ3B726 338 aaPredicted RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 FLAD1Q8NFF5 587 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 WHAMMQ8TF30 809 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 ANKRD2Q9GZV1 360 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 NBPF26B4DH59 902 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms