RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 CARMIL3Q8ND23 1372 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 SH3TC1Q8TE82 1336 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 SFPQP23246 707 aaKnown RBP eCLIP12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 ATL3Q6DD88 541 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 ADALQ6DHV7 355 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 FDPSP14324 419 aaKnown RBP12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 ERCC6LQ2NKX8 1250 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 E4F1Q66K89 784 aaPredicted RBP12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 HOMER1Q86YM7 354 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 C8orf76Q96K31 380 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 TRERF1Q96PN7 1200 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 DSCC1Q9BVC3 393 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 HELLSQ9NRZ9 838 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 SLC3A2P08195 630 aaKnown RBP12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 IFIT1P09914 478 aaKnown RBP12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 CABLES1Q8TDN4 633 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 A0A0G2JS52 829 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 SLFN14P0C7P3 912 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 LMOD1P29536 600 aaPredicted RBP12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 ARMCX5Q6P1M9 558 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 LINC00301Q8NCQ3 95 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 PPP1R13BQ96KQ4 1090 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 ST7Q9NRC1 585 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 RTEL1Q9NZ71 1219 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 KCNG1Q9UIX4 513 aa12.21□□□□□ -0.45
CX3CL1-201ENST00000006053 CHRM1P11229 460 aaPredicted RBP12.21□□□□□ -0.46
CX3CL1-201ENST00000006053 TPM4P67936 248 aa12.21□□□□□ -0.46
CX3CL1-201ENST00000006053 FKBP4Q02790 459 aaKnown RBP eCLIP12.21□□□□□ -0.46
CX3CL1-201ENST00000006053 RABL6Q3YEC7 729 aaPredicted RBP12.21□□□□□ -0.46
CX3CL1-201ENST00000006053 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.46
CX3CL1-201ENST00000006053 SYNE3Q6ZMZ3 975 aa12.21□□□□□ -0.46
CX3CL1-201ENST00000006053 ZNF274Q96GC6 653 aaPredicted RBP12.21□□□□□ -0.46
CX3CL1-201ENST00000006053 OSBPL5Q9H0X9 879 aaPredicted RBP12.21□□□□□ -0.46
CX3CL1-201ENST00000006053 MAST3O60307 1309 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 SALL1Q9NSC2 1324 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 KIF2AO00139 706 aaPredicted RBP12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 SPTLC2O15270 562 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 NRDCO43847 1150 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 APPP05067 770 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 SNRPA1P09661 255 aaKnown RBP12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 LRRN4CLQ8ND94 238 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 ZNF594Q96JF6 807 aaPredicted RBP12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 ORC3Q9UBD5 711 aaPredicted RBP12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 RFX7Q2KHR2 1363 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 CPLX1O14810 134 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 WASHC4Q2M389 1173 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 HSP90AB3PQ58FF7 597 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 AGXT2Q9BYV1 514 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 IMPACTQ9P2X3 320 aa12.2□□□□□ -0.46
CX3CL1-201ENST00000006053 M0R2C6 588 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 ZNF202O95125 648 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 MARCKSP29966 332 aaPredicted RBP12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 TERF2Q15554 542 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 CCDC150Q8NCX0 1101 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 KLF18A0A0U1RQI7 1052 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 ERICH4A6NGS2 130 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 GOLGA8BA8MQT2 603 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 RNF113AO15541 343 aaKnown RBP12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 LRRC24Q50LG9 513 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 KCNG4Q8TDN1 519 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 MRC1P22897 1456 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 ERBB3P21860 1342 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 A0A1W2PQ27 194 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 A0A1W2PQ64 194 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 A0A1W2PQD8 194 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 TATP17735 454 aaPredicted RBP12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 PTPN21Q16825 1174 aa12.19□□□□□ -0.46
CX3CL1-201ENST00000006053 OVOS2A0A0G2JMS6 1433 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 CSB-PGBD3P0DP91 1061 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 ATP1A3P13637 1013 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 ATF3P18847 181 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 OSBP2Q969R2 916 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 DNAI1Q9UI46 699 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 PHKG2P15735 406 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 NLRP12P59046 1061 aa12.18□□□□□ -0.46
CX3CL1-201ENST00000006053 PRC1O43663 620 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 FANCCQ00597 558 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 LRP10Q7Z4F1 713 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 PALLDQ8WX93 1383 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 USP54Q70EL1 1684 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 A0A1B0GUL7 405 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 PFKFB1P16118 471 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 FAM177A1Q8N128 213 aaPredicted RBP12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 FBXO18Q8NFZ0 1043 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 ZNF446Q9NWS9 450 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 KIF28PB7ZC32 967 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 SERPINC1P01008 464 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 FOXO4P98177 505 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 IMMTQ16891 758 aaKnown RBP12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 ARHGAP29Q52LW3 1261 aa12.17□□□□□ -0.46
CX3CL1-201ENST00000006053 YEATS4O95619 227 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 CASP7P55210 303 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 ANO1Q5XXA6 986 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms