RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Speer4dL7N216 212 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Dctn1O08788 1281 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Adcy5P84309 1262 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Bach2P97303 839 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Snai1Q02085 264 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Cep55Q8BT07 462 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Mroh6V9GX81 722 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Nup98Q6PFD9 1816 aaKnown RBP11.92□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Casp12O08736 419 aa11.92□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Tyro3P55144 880 aa11.92□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Amer1Q7TS75 1132 aa11.92□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Cnot6lQ8VEG6 555 aa11.92□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Mx2Q9WVP9 655 aa11.92□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Trip6Q9Z1Y4 480 aa11.92□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Mast3Q3U214 1321 aa11.92□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Ccdc112A0AUP1 442 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Frmd7A2AD83 703 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Hmx1O70218 332 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Ifit1bl2Q3U687 466 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Mindy4Q3UQI9 744 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 TrhQ62361 256 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Ccdc82Q6PG04 518 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Tpcn2Q8BWC0 731 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Klc3Q91W40 508 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Psrc1Q9D0P7 329 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 TnmdQ9EP64 317 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Ush1cQ9ES64 910 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Utp3Q9JI13 469 aaKnown RBP11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Nfe2l3Q9WTM4 660 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Rps6ka4Q9Z2B9 773 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 C4bP01029 1738 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Kansl3A2RSY1 903 aaKnown RBP11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Cfap58B2RW38 873 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Zkscan7E9PVW1 718 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Cyp2c23E9Q5K4 494 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Ppfia3P60469 1194 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 LyarQ08288 388 aaKnown RBP11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Pla2g4fQ50L41 855 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Kiaa0753Q6A000 959 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Acap3Q6NXL5 833 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Terf2ipQ91VL8 393 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Rrp9Q91WM3 475 aaKnown RBP11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Dpf1Q9QX66 387 aa11.91□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 FosbP13346 338 aa11.9□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 GabrdP22933 449 aa11.9□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Tbc1d31Q6NXY1 996 aa11.9□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Ube3cQ80U95 1083 aa11.9□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 U2af1l4Q8BGJ9 220 aa11.9□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Fsd2Q8BZ52 692 aa11.9□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Gpr108Q91WD0 569 aa11.9□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Bicd2Q921C5 820 aa11.9□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Col4a3bpQ9EQG9 624 aa11.9□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Brpf3B2KF05 1204 aaKnown RBP11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Gm20425E9Q035 978 aaKnown RBP11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Lipo1J3QME6 396 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Ccng2O08918 344 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Npy5rO70342 466 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Becn1O88597 448 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 SrprbP47758 269 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Cfap157Q0VFX2 523 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Znf496Q5SXI5 585 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Cdca8Q8BHX3 289 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Slc39a11Q8BWY7 342 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Mknk2Q8CDB0 459 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Snw1Q9CSN1 536 aaKnown RBP11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Odf2lQ9D478 642 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Zbtb43Q9DAI4 467 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Naa16Q9DBB4 864 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 FliiQ9JJ28 1271 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 CpdO89001 1377 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Med23Q80YQ2 1367 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Rgs12Q8CGE9 1381 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Aox4Q3TYQ9 1336 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Mctp1E9PV86 951 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Bach1P97302 739 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Hvcn1Q3U2S8 269 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Fbxo41Q6NS60 873 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Ufl1Q8CCJ3 793 aaKnown RBP11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 SdsQ8VBT2 327 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Ces1dQ8VCT4 565 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Telo2Q9DC40 840 aaKnown RBP11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 IcoslgQ9JHJ8 322 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Mmel1Q9JLI3 765 aa11.89□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Myh15E9Q264 1925 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Ube4aE9Q735 1028 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Pde6aP27664 859 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Bsdc1Q80Y55 427 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Lmod1Q8BVA4 595 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Plcd3Q8K2J0 785 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Tmem143Q8VD26 458 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 HdlbpQ8VDJ3 1268 aaKnown RBP11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Eaf2Q91ZD6 262 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Tbc1d7Q9D0K0 293 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 NgdnQ9DB96 315 aaKnown RBP11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Osbpl5Q9ER64 874 aa11.88□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Naaladl2A0A0N4SUJ3 795 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Cfap99A0A140LIX9 648 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Cyp26a1O55127 497 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Clec11aO88200 328 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 EzrP26040 586 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms