RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 CtcfQ61164 736 aaKnown RBP10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ppfibp1Q8C8U0 969 aaKnown RBP10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Usp11Q99K46 921 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Lrriq1Q0P5X1 1673 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Dnajc25A2ALW5 357 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Neurog2P70447 263 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Prdm1Q60636 856 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ifit1Q64282 463 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ppm1eQ80TL0 749 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 BrapQ99MP8 591 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Leo1Q5XJE5 667 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Gimap5Q8BWF2 308 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Psmd6Q99JI4 389 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Styxl1Q9DAR2 321 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Gm45140A0A0N4SUM8 220 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Smarcc1P97496 1104 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Traf3ip1Q149C2 625 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Slf2Q6P9P0 1278 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Erlin1Q91X78 346 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Mctp2Q5RJH2 878 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ppp2r5cQ60996 524 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Pnpla2Q8BJ56 486 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ttc12Q8BW49 704 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Efcab6Q6P1E8 1516 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Vwa3bJ9JI28 736 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Speer4dL7N216 212 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Gm156Q58A37 223 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Pex1Q5BL07 1284 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 RalylQ8BTF8 293 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 SdsQ8VBT2 327 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Klc3Q91W40 508 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Eif2ak4Q9QZ05 1648 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Sycp2lA0A0M3U1B0 842 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Sstr3P30935 428 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Atp12aQ9Z1W8 1035 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Kif24Q6NWW5 1356 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Zfp651E9PZ11 729 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Chl1P70232 1209 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ppp1r21Q3TDD9 780 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Stac3Q8BZ71 360 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Gm3409A0A0G2JE67 319 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ifit1bl2Q3U687 466 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Tsg101Q61187 391 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Myl10Q62082 202 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Rab3gap1Q80UJ7 981 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Nlgn1Q99K10 843 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 StambpQ9CQ26 424 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 AmfrQ9R049 643 aa10.44□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Jmjd4Q8BFT6 427 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Rdm1Q9CQK3 281 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Rusc2Q80U22 1514 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Cep170Q6A065 1588 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Kif2aP28740 705 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Pla2g4fQ50L41 855 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Atp1a2Q6PIE5 1020 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Tab2Q99K90 693 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Lonp2Q9DBN5 852 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Znf394Q9Z1D9 521 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Hdhd2Q3UGR5 259 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Pram1Q6BCL1 675 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 4930504O13RikQ8C5Z9 145 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Rtn1Q8K0T0 780 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Atp1a3Q6PIC6 1013 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Me3Q8BMF3 604 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Hip1rQ9JKY5 1068 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Iqca1lA6H690 825 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 TrdnE9Q9K5 693 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Gm29094F6Q785 221 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 MthfsQ9D110 203 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Pkp1P97350 728 aaKnown RBP10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Foxd4Q60688 444 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ankrd49Q8VE42 238 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Plekho1Q9JIY0 408 aa10.43□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Dennd3A2RT67 1274 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Zfp42P22227 288 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Capza3P70190 299 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ccnl1Q52KE7 532 aaKnown RBP10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Tbc1d5Q80XQ2 815 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Fam160b2Q80YR2 744 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 NpatQ8BMA5 1420 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Aox1O54754 1333 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ssrp1Q08943 708 aaKnown RBP10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Unc5clQ6R653 518 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Naa25Q8BWZ3 972 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Wdr24Q8CFJ9 790 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Prkag2Q91WG5 566 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Fam213aQ9CYH2 218 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Riok3Q9DBU3 519 aaKnown RBP10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 GancQ8BVW0 898 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Gm9992B2RWK3 458 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Tbc1d2bQ3U0J8 965 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Unc93aQ710D3 458 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 9230110C19RikQ8CC70 267 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Nrbp1Q99J45 535 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Kdm3aQ6PCM1 1323 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Fam114a1Q9D281 569 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Olr1Q9EQ09 363 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 TnksQ6PFX9 1320 aa10.42□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Adora1Q60612 326 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 ThemisQ8BGW0 636 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms