RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Krt24A1L317 512 aa11.77□□□□□ -0.52
Usp4-209ENSMUST00000194959 CltaO08585 235 aa11.77□□□□□ -0.52
Usp4-209ENSMUST00000194959 Slc4a4O88343 1079 aa11.77□□□□□ -0.52
Usp4-209ENSMUST00000194959 Zc3h12cQ5DTV4 884 aa11.77□□□□□ -0.52
Usp4-209ENSMUST00000194959 Anp32cQ64G17 123 aa11.77□□□□□ -0.52
Usp4-209ENSMUST00000194959 Znf653Q6YND2 615 aa11.77□□□□□ -0.52
Usp4-209ENSMUST00000194959 Eaf2Q91ZD6 262 aa11.77□□□□□ -0.52
Usp4-209ENSMUST00000194959 Add3Q9QYB5 706 aaKnown RBP11.77□□□□□ -0.52
Usp4-209ENSMUST00000194959 Zscan29E9Q5B4 869 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 Cyp26a1O55127 497 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 RubcnlQ3TD16 648 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 ZyxQ62523 564 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ehd2Q8BH64 543 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 Sgsm1Q8BPQ7 1093 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 Slx1bQ8BX32 270 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 Rec8Q8C5S7 591 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 Kiaa0753Q6A000 959 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 SnrkQ8VDU5 748 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 Tktl2Q9D4D4 627 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 Tbc1d8Q9Z1A9 1134 aa11.77□□□□□ -0.53
Usp4-209ENSMUST00000194959 Npc1l1Q6T3U4 1333 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Tbc1d4Q8BYJ6 1307 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 TbcaP48428 108 aaKnown RBP11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Exosc10P56960 887 aaKnown RBP11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Smarcc1P97496 1104 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Atp8a2P98200 1148 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Prpf4bQ61136 1007 aaKnown RBP11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Arid5bQ8BM75 1188 aaKnown RBP11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Mylk2Q8VCR8 613 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Rbm43Q99J64 343 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Syt10Q9R0N4 523 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Atp2b1G5E829 1220 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Rgs9O54828 675 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Mapkapk5O54992 473 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Abtb2Q7TQI7 1024 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ankrd23Q812A3 306 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Kcnj14Q8JZN3 434 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Pnma3Q8JZW8 466 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ciao1Q99KN2 339 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Stox1B2RQL2 990 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Cspp1B2RX88 1205 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Speer4dL7N216 212 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ncaph2Q8BSP2 607 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Shisa4Q8CA71 197 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Mtmr3Q8K296 1196 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 NsmfQ99NF2 532 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Dbndd1Q9CZ00 160 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Suclg2Q9Z2I8 433 aa11.76□□□□□ -0.53
Usp4-209ENSMUST00000194959 Cplx2P84086 134 aa11.75□□□□□ -0.53
Usp4-209ENSMUST00000194959 Tmem59lQ7TNI2 337 aa11.75□□□□□ -0.53
Usp4-209ENSMUST00000194959 Otop3Q80UF9 577 aa11.75□□□□□ -0.53
Usp4-209ENSMUST00000194959 Tpcn2Q8BWC0 731 aa11.75□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ubxn4Q8VCH8 506 aa11.75□□□□□ -0.53
Usp4-209ENSMUST00000194959 Sept1P42209 366 aa11.75□□□□□ -0.53
Usp4-209ENSMUST00000194959 Cdcp1Q5U462 833 aa11.75□□□□□ -0.53
Usp4-209ENSMUST00000194959 Riok1Q922Q2 567 aa11.75□□□□□ -0.53
Usp4-209ENSMUST00000194959 Dnajc25A2ALW5 357 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Trim30aP15533 496 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 EzrP26040 586 aaKnown RBP11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Snrpa1P57784 255 aaKnown RBP11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Fam83bQ0VBM2 1012 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Llgl2Q3TJ91 1027 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ttc12Q8BW49 704 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Krt84Q99M73 603 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Col4a3bpQ9EQG9 624 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Atp8b3Q6UQ17 1335 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Prl3d1P18121 224 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Acot9Q9R0X4 439 aaKnown RBP11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Cdc45Q9Z1X9 566 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Crb1Q8VHS2 1405 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ddx60E9PZQ1 1711 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Pramel3A2AHA7 463 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Gm7903A2AWL1 463 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 AV320801A2AWL3 467 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Gm15023L7MUB4 467 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ccp110Q7TSH4 1004 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Mknk2Q8CDB0 459 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 SrrtQ99MR6 875 aaKnown RBP11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Mroh6V9GX81 722 aa11.74□□□□□ -0.53
Usp4-209ENSMUST00000194959 Alpk3Q924C5 1678 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Sptlc2P97363 560 aaKnown RBP11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Znf496Q5SXI5 585 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Cfap69Q8BH53 942 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 AbraQ8BUZ1 375 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ift57Q8BXG3 429 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Vps16Q920Q4 839 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 ParvgQ9ERD8 331 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Mast3Q3U214 1321 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Tom1O88746 492 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 MsnP26041 577 aaKnown RBP11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Pald1P70261 859 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ppp1r21Q3TDD9 780 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Mctp2Q5RJH2 878 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Sept9Q80UG5 583 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ppp4r3bQ922R5 820 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ccdc47Q9D024 483 aaKnown RBP11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Bcl2l12Q9D3J3 255 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ccdc39Q9D5Y1 937 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Foxo4Q9WVH3 505 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Slurp2P0DP59 97 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms