RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Ankrd63A2ARS0 390 aa12.78□□□□□ -0.36
Lig3-212ENSMUST00000173727 PtmaP26350 111 aa12.78□□□□□ -0.36
Lig3-212ENSMUST00000173727 Spty2d1Q68FG3 682 aa12.78□□□□□ -0.36
Lig3-212ENSMUST00000173727 Ccdc158Q8CDI6 1109 aa12.78□□□□□ -0.36
Lig3-212ENSMUST00000173727 Sytl4Q9R0Q1 673 aa12.78□□□□□ -0.36
Lig3-212ENSMUST00000173727 Elmsan1E9Q2I4 1089 aaKnown RBP12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 Syt1P46096 421 aa12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 Gdpd2Q9ESM6 539 aa12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 A0A1W2P7S8 802 aa12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 Cyp2d9P11714 504 aa12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 Atp6v0a2P15920 856 aa12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 Psd3Q2PFD7 1037 aa12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 Ppp1r21Q3TDD9 780 aa12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 Cdc5lQ6A068 802 aaKnown RBP12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 Tbc1d7Q9D0K0 293 aa12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 MthfsQ9D110 203 aa12.77□□□□□ -0.36
Lig3-212ENSMUST00000173727 PtmsQ9D0J8 101 aaKnown RBP12.77□□□□□ -0.37
Lig3-212ENSMUST00000173727 Slfn1Q9Z0I7 337 aa12.77□□□□□ -0.37
Lig3-212ENSMUST00000173727 Usp42B2RQC2 1324 aaKnown RBP12.77□□□□□ -0.37
Lig3-212ENSMUST00000173727 Sik3Q6P4S6 1311 aa12.77□□□□□ -0.37
Lig3-212ENSMUST00000173727 Fbxl16A2RT62 479 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Dhx16G3X8X0 1044 aaKnown RBP12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Stat5bP42232 786 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Apba2P98084 750 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Hand2Q61039 217 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Ddrgk1Q80WW9 315 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 ImmtQ8CAQ8 757 aaKnown RBP12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Mrpl50Q8VDT9 159 aaKnown RBP12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Mast3Q3U214 1321 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Carmil3Q3UFQ8 1375 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 CrcpO35427 148 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Ercc3P49135 783 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Irf5P56477 497 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 NfixP70257 488 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Rbm15bQ6PHZ5 887 aaKnown RBP12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Rbm33Q9CXK9 1231 aaKnown RBP12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 IcoslgQ9JHJ8 322 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Phrf1A6H619 1682 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Zbtb7aO88939 569 aaKnown RBP12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Letm1Q9Z2I0 738 aa12.76□□□□□ -0.37
Lig3-212ENSMUST00000173727 Tuft1O08970 390 aa12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Mapkapk5O54992 473 aa12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 UvssaQ9D479 717 aa12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Olfm5Q8BU90 496 aa12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Smc3Q9CW03 1217 aaKnown RBP12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Kif23E9Q5G3 953 aa12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Gm5592Q3V0A6 857 aa12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Gm21985Q6P6P5 1106 aa12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Alx1Q8C8B0 326 aa12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Tubb6Q922F4 447 aa12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Pes1Q9EQ61 584 aaKnown RBP12.75□□□□□ -0.37
Lig3-212ENSMUST00000173727 Znf326O88291 580 aa12.74□□□□□ -0.37
Lig3-212ENSMUST00000173727 Mrpl12Q9DB15 201 aaKnown RBP12.74□□□□□ -0.37
Lig3-212ENSMUST00000173727 Atad2Q8CDM1 1040 aa12.74□□□□□ -0.37
Lig3-212ENSMUST00000173727 Kcnq3Q8K3F6 873 aa12.74□□□□□ -0.37
Lig3-212ENSMUST00000173727 Bloc1s4Q8VED2 215 aa12.74□□□□□ -0.37
Lig3-212ENSMUST00000173727 Ambra1A2AH22 1300 aa12.74□□□□□ -0.37
Lig3-212ENSMUST00000173727 Arfgef1G3X9K3 1846 aaKnown RBP12.74□□□□□ -0.37
Lig3-212ENSMUST00000173727 Cyp24a1Q64441 514 aa12.74□□□□□ -0.37
Lig3-212ENSMUST00000173727 Sned1Q70E20 1403 aa12.73□□□□□ -0.37
Lig3-212ENSMUST00000173727 Krt24A1L317 512 aa12.73□□□□□ -0.37
Lig3-212ENSMUST00000173727 Krt40Q6IFX3 439 aa12.73□□□□□ -0.37
Lig3-212ENSMUST00000173727 Cfap69Q8BH53 942 aa12.73□□□□□ -0.37
Lig3-212ENSMUST00000173727 Frmd7A2AD83 703 aa12.73□□□□□ -0.37
Lig3-212ENSMUST00000173727 Ythdc1E9Q5K9 736 aaKnown RBP12.73□□□□□ -0.37
Lig3-212ENSMUST00000173727 Spg7Q3ULF4 781 aa12.73□□□□□ -0.37
Lig3-212ENSMUST00000173727 Fchsd1Q6PFY1 688 aa12.73□□□□□ -0.37
Lig3-212ENSMUST00000173727 Fam83bQ0VBM2 1012 aa12.73□□□□□ -0.37
Lig3-212ENSMUST00000173727 Gm45015A0A140LII9 184 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Gm18336A0A140LIU8 765 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 NapbP28663 298 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Zdhhc9P59268 364 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Cnot6lQ8VEG6 555 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 NsmfQ99NF2 532 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Togaram1Q6A070 1776 aaKnown RBP12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Slc4a4O88343 1079 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Gnat2P50149 354 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 SfswapQ3USH5 945 aaKnown RBP12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Agtpbp1Q641K1 1218 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Col23a1Q8K4G2 532 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Ltn1Q6A009 1767 aa12.72□□□□□ -0.37
Lig3-212ENSMUST00000173727 Rasa1E9PYG6 1038 aa12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Dok7Q18PE0 504 aa12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Glg1Q61543 1175 aaKnown RBP12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Ppp1r10Q80W00 888 aaKnown RBP12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Bag4Q8CI61 457 aa12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 RarsQ9D0I9 660 aaKnown RBP12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Gm29094F6Q785 221 aa12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Bend4P86174 541 aa12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Shisa4Q8CA71 197 aa12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Pms1Q8K119 917 aa12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Rbm43Q99J64 343 aa12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Cxcl11Q9JHH5 100 aa12.71□□□□□ -0.37
Lig3-212ENSMUST00000173727 Myh13B1AR69 1938 aa12.71□□□□□ -0.38
Lig3-212ENSMUST00000173727 Ccdc6D3YZP9 469 aa12.71□□□□□ -0.38
Lig3-212ENSMUST00000173727 Stat1P42225 749 aa12.71□□□□□ -0.38
Lig3-212ENSMUST00000173727 Exosc10P56960 887 aaKnown RBP12.71□□□□□ -0.38
Lig3-212ENSMUST00000173727 Ccdc51Q3URS9 406 aa12.71□□□□□ -0.38
Lig3-212ENSMUST00000173727 Ncaph2Q8BSP2 607 aa12.71□□□□□ -0.38
Lig3-212ENSMUST00000173727 Iffo2Q8R2V2 512 aa12.71□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms