RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Mdh1bQ5F204 500 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Naa15Q80UM3 865 aaKnown RBP13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ankrd24Q80VM7 985 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Miga2Q8BK03 593 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ndufab1Q9CR21 156 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Paip2Q9D6V8 124 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Znf287Q9EQB9 759 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Sycp2lA0A0M3U1B0 842 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Gm29094F6Q785 221 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Tsg101Q61187 391 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 MthfsQ9D110 203 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Eftud2O08810 971 aaKnown RBP13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 PpardP35396 440 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Rps6ka5Q8C050 863 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Slc4a8Q8JZR6 1089 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Nfe2l3Q9WTM4 660 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Brpf3B2KF05 1204 aaKnown RBP13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Pkp1P97350 728 aaKnown RBP13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Lrrfip1Q3UZ39 729 aaKnown RBP13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Kcnj14Q8JZN3 434 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Aldh1l2Q8K009 923 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Nlgn1Q99K10 843 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 HgsQ99LI8 775 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Pdcd6ipQ9WU78 869 aaKnown RBP13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Kcnh3Q9WVJ0 1095 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 NpcdF8VQB8 469 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Slc1a4O35874 532 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Tlr7P58681 1050 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Cct6aP80317 531 aaKnown RBP13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Drc1Q3USS3 753 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Tbc1d8bA3KGB4 1114 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 DgkiD3YWQ0 1071 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Kiaa1328Q6NZK5 612 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Usp11Q99K46 921 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 CpvlQ9D3S9 478 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ccdc105Q9D4K7 499 aa13.22□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Capn2O08529 700 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Gngt1Q61012 74 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Gdap1l1Q8VE33 370 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Nap1l5Q9JJF0 156 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Gm5624F6ZZG8 207 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Cacna2d4Q5RJF7 1116 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Mctp2Q5RJH2 878 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Adam1aQ60813 791 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 SncbQ91ZZ3 133 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Col4a3bpQ9EQG9 624 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Abcc1O35379 1528 aa13.21□□□□□ -0.29
Ndc1-204ENSMUST00000139560 CrklP47941 303 aa13.21□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Hook3Q8BUK6 718 aa13.21□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Kcnk13Q8R1P5 405 aa13.21□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Golga5Q9QYE6 729 aa13.21□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Abcc6Q9R1S7 1498 aa13.21□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Cd22P35329 862 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Lrrc8aQ80WG5 810 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Naa25Q8BWZ3 972 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Slain2Q8CI08 581 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Lrrc45Q8CIM1 670 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 BrapQ99MP8 591 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Myl6bQ8CI43 207 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ubxn1Q922Y1 297 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Dennd4bQ3U1Y4 1499 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Trap1aP19473 224 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Mnat1P51949 309 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Irx2P81066 474 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Tsga10Q6NY15 697 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 SympkQ80X82 1284 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Nop53Q8BK35 484 aaKnown RBP13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 PdclQ9DBX2 301 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Nckap5lQ6GQX2 1323 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ovgp1Q62010 721 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Znf532Q6NXK2 1036 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Rtn1Q8K0T0 780 aa13.2□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Gm28919A0A087WP35 240 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Abcb6Q9DC29 842 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Dennd3A2RT67 1274 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ccdc121E9Q6D3 323 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ncf1Q09014 390 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Mcm7Q61881 719 aaKnown RBP13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Krit1Q6S5J6 736 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 DlatQ8BMF4 642 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Armc9Q9D2I5 817 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Tfcp2Q9ERA0 502 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Pde6aP27664 859 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Tm6sf1P58749 370 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Adcy3Q8VHH7 1145 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Kiaa1107Q80TK0 1369 aa13.19□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Vwa3bJ9JI28 736 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 MybP06876 636 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Specc1lQ2KN98 1118 aaKnown RBP13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Vps41Q5KU39 853 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Glg1Q61543 1175 aaKnown RBP13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Sh3d21Q7TSG5 549 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Cfap100Q80VN0 613 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Atp8b3Q6UQ17 1335 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Usp19Q3UJD6 1360 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ugt1a5B2RT14 529 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Eme2Q56A04 373 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Sdad1Q80UZ2 687 aaKnown RBP13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ccdc186Q8C9S4 917 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 AatkQ80YE4 1365 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms