RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Ppfia1B2RXQ2 1266 aa11.7□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Gm1043A0A140LJC2 1431 aa11.7□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Calml3Q9D6P8 149 aa11.7□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Cd274Q9EP73 290 aa11.7□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Pram1Q6BCL1 675 aa11.7□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Larp6Q8BN59 492 aa11.7□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Rbm33Q9CXK9 1231 aaKnown RBP11.7□□□□□ -0.54
Scn9a-201ENSMUST00000100063 AmfrQ9R049 643 aa11.7□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Mcm3P25206 812 aaKnown RBP11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Pla2g4fQ50L41 855 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Mettl24Q8CCB5 363 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Kdm5bQ80Y84 1544 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ccdc174Q3U155 467 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Rab34Q64008 259 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Nop56Q9D6Z1 580 aaKnown RBP11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ccdc185Q3V118 621 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Esco1Q69Z69 843 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ddx31Q6NZQ2 687 aaKnown RBP11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Srgap1Q91Z69 1062 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Prdm2A2A7B5 1709 aaKnown RBP11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Phf23Q8BSN5 401 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ythdc2B2RR83 1445 aaKnown RBP11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Gm10378F6XQQ1 160 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 MycbpapQ5SUV2 932 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 BlvraQ9CY64 295 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Tpcn1Q9EQJ0 817 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Speer2E9Q9U2 264 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Zap70P43404 618 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Grm1P97772 1199 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Apol7cQ8C6E1 369 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Tex19.1Q99MV2 351 aa11.69□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Rad50P70388 1312 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Syne3Q4FZC9 975 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Vps41Q5KU39 853 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Sall3Q62255 1320 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Jade3Q6IE82 823 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Gtpbp10Q8K013 366 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ccdc12Q8R344 166 aaKnown RBP11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Grin2aP35436 1464 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Klhl34A2AI76 644 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Otud7bB2RUR8 840 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ift122Q6NWV3 1182 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Tpx2A2APB8 745 aaKnown RBP11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Cdr1E9Q0B4 517 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 EvcP57680 1005 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ahcyl2Q68FL4 613 aaKnown RBP11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Actr5Q80US4 605 aaKnown RBP11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Cd2bp2Q9CWK3 342 aaKnown RBP11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Bnip3lQ9Z2F7 218 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 CltaO08585 235 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Spata18Q0P557 537 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 MpndQ3TV65 487 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 ThemisQ8BGW0 636 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Atp2a1Q8R429 994 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Dnajc10Q9DC23 793 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Supt6hQ62383 1726 aaKnown RBP11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Tnni3P48787 211 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Fam107bQ3TGF2 131 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Fam177a1Q8BR63 207 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ccdc189Q6NZQ0 333 aa11.68□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Nlrp1bA1Z198 1177 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Astn2Q80Z10 1352 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Spc25Q3UA16 226 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Psmd6Q99JI4 389 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Plcb3P51432 1234 aaKnown RBP11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ppfia3P60469 1194 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Brd3Q8K2F0 726 aaKnown RBP11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ccdc70Q9D9B0 223 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Akr1b8P45377 316 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ssh1Q76I79 1042 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Svs3bQ8BZH8 265 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Talpid3E9PV87 1520 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Stim2P83093 746 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Gpr161B2RPY5 545 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ccpg1Q640L3 753 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Crybg3Q80W49 1005 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Fyb2A2A995 729 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Slc18a1Q8R090 521 aa11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Rbm10Q99KG3 930 aaKnown RBP11.67□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Lamc3Q9R0B6 1581 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Eef2P58252 858 aaKnown RBP11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Aplp1Q03157 653 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Clul1Q3ZRW6 464 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Anapc5Q8BTZ4 740 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Scyl2Q8CFE4 930 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Gm38392E9Q2A2 434 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 YwhaeP62259 255 aaKnown RBP11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Cct8l1Q80YT3 562 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Snw1Q9CSN1 536 aaKnown RBP11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Atp6v1e2Q9D593 226 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Cage1Q5IR70 849 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Bicdl2Q8CHW5 507 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Fancd2Q80V62 1450 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Arhgef10lA2AWP8 1280 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 1700006A11RikB9EHI3 544 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 OscarQ8VBT3 265 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Atxn3Q9CVD2 355 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ccdc91Q9D8L5 442 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Pcf11G3X9Z4 1553 aa11.66□□□□□ -0.54
Scn9a-201ENSMUST00000100063 Ube3aO08759 870 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms