RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Tti2Q8BGV4 512 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Traf3ip3Q8C0G2 513 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Sox30Q8CGW4 782 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Hip1rQ9JKY5 1068 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Add2Q9QYB8 725 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Kif1bQ60575 1816 aaKnown RBP11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Exoc4O35382 975 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 MpripP97434 1024 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 RalgdsQ03385 852 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Phf8Q80TJ7 1023 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Naa25Q8BWZ3 972 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ppfibp1Q8C8U0 969 aaKnown RBP11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Lnx1O70263 728 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Kdm2aP59997 1161 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Nbr1P97432 988 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 ItpripQ3TNL8 555 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Sco1Q5SUC9 284 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Larp1Q6ZQ58 1072 aaKnown RBP11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Cdc23Q8BGZ4 597 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ric3Q8BPM6 367 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Nek9Q8K1R7 984 aa11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ccdc12Q8R344 166 aaKnown RBP11.12□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Gga2Q6P5E6 603 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Cep57l1Q8VDS7 400 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 MafgO54790 162 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Rb1P13405 921 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 SfswapQ3USH5 945 aaKnown RBP11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Prdm10Q3UTQ7 1184 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Mybpc2Q5XKE0 1136 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Rgl2Q61193 778 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 ApobrQ8VBT6 942 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 ToporslQ9D2F8 683 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Dusp10Q9ESS0 483 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Tnip1Q9WUU8 647 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Magi2Q9WVQ1 1275 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Abca17E9PX95 1733 aa11.11□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Frmpd2A0A140LI67 1392 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Apol8A2VDH7 339 aaKnown RBP11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 E9QMW4 1145 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 1700122O11RikJ3QPW6 241 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ap1g2O88512 791 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Nlrp4cQ3TKR3 982 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Tsga10Q6NY15 697 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Stambpl1Q76N33 436 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Eif3hQ91WK2 352 aaKnown RBP11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Gigyf1Q99MR1 1044 aaKnown RBP11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ebag9Q9D0V7 213 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Mlh1Q9JK91 760 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Birc5O70201 140 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Prim1P20664 417 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Prkar2bP31324 416 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Surf6P70279 355 aaKnown RBP11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Puf60Q3UEB3 564 aaKnown RBP11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Drc7Q6V3W6 876 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Suds3Q8BR65 328 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Atp10aO54827 1508 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Synj2Q9D2G5 1434 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Uggt1Q6P5E4 1551 aa11.1□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Kif20bQ80WE4 1774 aaKnown RBP11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Bbof1Q3V079 533 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Mtmr3Q8K296 1196 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 SnrkQ8VDU5 748 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Sos1Q62245 1319 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Kdm7aQ3UWM4 940 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Usp28Q5I043 1051 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Tsr1Q5SWD9 803 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Wdr35Q8BND3 1181 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Lmod1Q8BVA4 595 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Q9D9S1 216 aa11.09□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Cpsf2O35218 782 aaKnown RBP11.08□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Nub1P54729 614 aa11.08□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Usp40Q8BWR4 1235 aa11.08□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Adcy3Q8VHH7 1145 aa11.08□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ankrd1Q9CR42 319 aa11.08□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 VirmaA2AIV2 1811 aaKnown RBP11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Eif3j1Q3UGC7 261 aaKnown RBP11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Gngt1Q61012 74 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Sh3gl2Q62420 352 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Eif3j2Q66JS6 263 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 CgasQ8C6L5 507 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Luzp1Q8R4U7 1068 aaKnown RBP11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Apbb1ipQ8R5A3 670 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Rrp1bQ91YK2 724 aaKnown RBP11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Gkap1Q9JMB0 366 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 MaddQ80U28 1577 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Gm20521D3Z5F7 333 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Tbc1d2bQ3U0J8 965 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Cyb5d1Q5NCY3 228 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 3830417A13RikQ8BQJ2 303 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 WdpcpQ8C456 722 aa11.08□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Arfgef2A2A5R2 1792 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Nrxn1Q9CS84 1514 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 CidebO70303 219 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Myo1fP70248 1099 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Stim1P70302 685 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Fchsd2Q3USJ8 740 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ubash3aQ3V3E1 624 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ahcyl1Q80SW1 530 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Lrsam1Q80ZI6 727 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Kirrel3Q8BR86 778 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms