RNA–Protein interactions for RNA: ENSMUST00000072551.6

Clrn1-203, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 1,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-203ENSMUST00000072551 Jag1Q9QXX0 1218 aa13.79□□□□□ -0.2
Clrn1-203ENSMUST00000072551 FAM186AQ9D9R9 1790 aa13.78□□□□□ -0.2
Clrn1-203ENSMUST00000072551 Pappa2E9PZ87 1789 aa13.78□□□□□ -0.2
Clrn1-203ENSMUST00000072551 Gm3893E9Q1I1 302 aa13.78□□□□□ -0.2
Clrn1-203ENSMUST00000072551 Tuft1O08970 390 aa13.78□□□□□ -0.2
Clrn1-203ENSMUST00000072551 Psmd14O35593 310 aa13.78□□□□□ -0.2
Clrn1-203ENSMUST00000072551 Nkx1-2P42580 305 aa13.78□□□□□ -0.2
Clrn1-203ENSMUST00000072551 Pdzrn3Q69ZS0 1063 aa13.78□□□□□ -0.2
Clrn1-203ENSMUST00000072551 Q9D2X8 372 aa13.78□□□□□ -0.2
Clrn1-203ENSMUST00000072551 Nek4Q9Z1J2 792 aa13.78□□□□□ -0.2
Clrn1-203ENSMUST00000072551 Map7O88735 730 aa13.77□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Slc7a3P70423 618 aa13.77□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Spg7Q3ULF4 781 aa13.77□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Il17raQ60943 864 aa13.77□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Znf18Q810A1 556 aa13.77□□□□□ -0.21
Clrn1-203ENSMUST00000072551 RarsQ9D0I9 660 aaKnown RBP13.77□□□□□ -0.21
Clrn1-203ENSMUST00000072551 FliiQ9JJ28 1271 aa13.77□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Polr2aP08775 1970 aaKnown RBP13.77□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Npc1l1Q6T3U4 1333 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Krt24A1L317 512 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Cyp2d9P11714 504 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Pdia3P27773 505 aaKnown RBP13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 NogP97466 232 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Tbc1d9Q3UYK3 1264 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Ptrh1Q8BW00 204 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Rhot2Q8JZN7 620 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Uba5Q8VE47 403 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Stag1Q9D3E6 1258 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Klf15Q9EPW2 415 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Bcorl1A2AQH4 1781 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Tspoap1Q7TNF8 1846 aa13.76□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Hoxa7P02830 229 aa13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Thrap3Q569Z6 951 aaKnown RBP13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Tor1aip2Q8BYU6 502 aa13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 CenppQ9CZ92 286 aa13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 1700018B08RikQ9DA83 213 aa13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 IcoslgQ9JHJ8 322 aa13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Col1a1P11087 1453 aa13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Znf638Q61464 1960 aaKnown RBP13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Large2Q5XPT3 690 aa13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Tmem179Q8BHH9 233 aa13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Bmp2kQ91Z96 1138 aa13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 KnstrnQ9D9Z1 312 aaKnown RBP13.75□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Adgra3Q7TT36 1310 aa13.74□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Mdm2P23804 489 aa13.74□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Lrch1P62046 709 aa13.74□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Zc3h15Q3TIV5 426 aaKnown RBP13.74□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Map9Q3TRR0 646 aa13.74□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Rnf180Q3U827 592 aa13.74□□□□□ -0.21
Clrn1-203ENSMUST00000072551 SfswapQ3USH5 945 aaKnown RBP13.74□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Ddx31Q6NZQ2 687 aaKnown RBP13.74□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Lmod1Q8BVA4 595 aa13.74□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Glt1d1A4FUP9 346 aa13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Ifi207E9Q3L4 978 aa13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Dcdc2bF7BCK0 340 aa13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Prl7d1P04769 244 aa13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Usp48Q3V0C5 1052 aa13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Kif22Q3V300 660 aa13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Cdcp1Q5U462 833 aa13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Krt40Q6IFX3 439 aa13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Gm2163Q6PCY5 473 aa13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 AfdnQ9QZQ1 1820 aaKnown RBP13.73□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Trim56Q80VI1 734 aaKnown RBP13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Lmbrd2Q8C561 694 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Glis2Q8VDL9 521 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Ppp6r3Q922D4 844 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Tmem79Q9D709 391 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Tm4sf1Q64302 202 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Ccdc93Q7TQK5 629 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Mb21d2Q8C525 428 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Shtn1Q8K2Q9 631 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Kcnq3Q8K3F6 873 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Ppp4r3bQ922R5 820 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 MthfsQ9D110 203 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Nfe2l3Q9WTM4 660 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Epb41l3Q9WV92 929 aa13.72□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Plxnb2B2RXS4 1842 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Myh2G3UW82 1942 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Pcdh15Q99PJ1 1943 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 SisF8VQM5 1818 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Dynll1P63168 89 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 GmpsQ3THK7 693 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Cyp24a1Q64441 514 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Zcwpw1Q6IR42 630 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Spon1Q8VCC9 807 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Polr3dQ91WD1 398 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Txnrd3Q99MD6 652 aa13.71□□□□□ -0.21
Clrn1-203ENSMUST00000072551 Trpm7Q923J1 1863 aa13.71□□□□□ -0.22
Clrn1-203ENSMUST00000072551 D1Pas1P16381 660 aa13.7□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Nucb1Q02819 459 aaKnown RBP13.7□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Scaf8Q6DID3 1268 aa13.7□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Cfap69Q8BH53 942 aa13.7□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Frmd7A2AD83 703 aa13.69□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Nolc1E9Q5C9 702 aaKnown RBP13.69□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Eif6O55135 245 aa13.69□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Slc10a5Q5PT54 434 aa13.69□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Tom1l2Q5SRX1 507 aa13.69□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Ankrd13aQ80UP5 588 aa13.69□□□□□ -0.22
Clrn1-203ENSMUST00000072551 SpidrQ8BGX7 933 aa13.69□□□□□ -0.22
Clrn1-203ENSMUST00000072551 Tmem67Q8BR76 992 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms