RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Nbr1P97432 988 aa16.92■□□□□ 0.3
Msx3-201ENSMUST00000055353 Atf3Q60765 181 aa16.92■□□□□ 0.3
Msx3-201ENSMUST00000055353 Kiaa0753Q6A000 959 aa16.92■□□□□ 0.3
Msx3-201ENSMUST00000055353 Tbc1d7Q9D0K0 293 aa16.92■□□□□ 0.3
Msx3-201ENSMUST00000055353 Zfp142G5E869 1843 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Tcof1O08784 1320 aaKnown RBP16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Prdm1Q60636 856 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Fam213aQ9CYH2 218 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Mrps25Q9D125 171 aaKnown RBP16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Col22a1E9Q7P1 1613 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Itga6Q61739 1091 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Edrf1Q6GQV7 1239 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Map10Q8BJS7 891 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Tmem266Q8BZB3 538 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Lrrc2Q8VDB8 371 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Stk38Q91VJ4 465 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Mei1Q9D4I2 1268 aa16.91■□□□□ 0.3
Msx3-201ENSMUST00000055353 Cfap99A0A140LIX9 648 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 Zbtb21E9Q444 1094 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 Ubap1lG3UW59 384 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 Cyp2d9P11714 504 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 Fam170aQ66LM6 333 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 Acap3Q6NXL5 833 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 Cdca8Q8BHX3 289 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 GptQ8QZR5 496 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 Sil1Q9EPK6 465 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 FocadA2AKG8 1798 aa16.9■□□□□ 0.3
Msx3-201ENSMUST00000055353 Cyp3a57D3YYZ0 503 aa16.89■□□□□ 0.3
Msx3-201ENSMUST00000055353 Sh3bp1P55194 680 aa16.89■□□□□ 0.3
Msx3-201ENSMUST00000055353 Llgl2Q3TJ91 1027 aa16.89■□□□□ 0.3
Msx3-201ENSMUST00000055353 Skap1Q3UUV5 355 aa16.89■□□□□ 0.3
Msx3-201ENSMUST00000055353 Luzp1Q8R4U7 1068 aaKnown RBP16.89■□□□□ 0.3
Msx3-201ENSMUST00000055353 Adam1bQ8R534 806 aa16.89■□□□□ 0.3
Msx3-201ENSMUST00000055353 Emilin1Q99K41 1017 aa16.89■□□□□ 0.3
Msx3-201ENSMUST00000055353 Xpo4Q9ESJ0 1151 aa16.89■□□□□ 0.3
Msx3-201ENSMUST00000055353 Abca3Q8R420 1704 aa16.89■□□□□ 0.29
Msx3-201ENSMUST00000055353 Wnk3Q80XP9 1757 aa16.89■□□□□ 0.29
Msx3-201ENSMUST00000055353 Zfp397Q7TNK4 527 aa16.89■□□□□ 0.29
Msx3-201ENSMUST00000055353 Cap2Q9CYT6 476 aa16.89■□□□□ 0.29
Msx3-201ENSMUST00000055353 Naa16Q9DBB4 864 aa16.89■□□□□ 0.29
Msx3-201ENSMUST00000055353 Pde3aQ9Z0X4 1141 aa16.89■□□□□ 0.29
Msx3-201ENSMUST00000055353 Large1Q9Z1M7 756 aa16.89■□□□□ 0.29
Msx3-201ENSMUST00000055353 L1td1Q587J6 782 aaKnown RBP16.88■□□□□ 0.29
Msx3-201ENSMUST00000055353 Acnat2Q8BGG9 420 aa16.88■□□□□ 0.29
Msx3-201ENSMUST00000055353 Amigo3Q8C2S7 508 aa16.88■□□□□ 0.29
Msx3-201ENSMUST00000055353 Smc4Q8CG47 1286 aa16.88■□□□□ 0.29
Msx3-201ENSMUST00000055353 Sptlc2P97363 560 aaKnown RBP16.88■□□□□ 0.29
Msx3-201ENSMUST00000055353 Zkscan8Q8BSL0 588 aa16.88■□□□□ 0.29
Msx3-201ENSMUST00000055353 Cep55Q8BT07 462 aa16.88■□□□□ 0.29
Msx3-201ENSMUST00000055353 Kiaa1524Q8BWY9 907 aa16.88■□□□□ 0.29
Msx3-201ENSMUST00000055353 Znf568E9PYI1 671 aa16.87■□□□□ 0.29
Msx3-201ENSMUST00000055353 Gpr182P43142 395 aa16.87■□□□□ 0.29
Msx3-201ENSMUST00000055353 Acsbg1Q99PU5 721 aa16.87■□□□□ 0.29
Msx3-201ENSMUST00000055353 Sik3Q6P4S6 1311 aa16.87■□□□□ 0.29
Msx3-201ENSMUST00000055353 Sall1Q9ER74 1322 aa16.87■□□□□ 0.29
Msx3-201ENSMUST00000055353 Nrxn3Q6P9K9 1571 aa16.87■□□□□ 0.29
Msx3-201ENSMUST00000055353 TsksO54887 585 aa16.87■□□□□ 0.29
Msx3-201ENSMUST00000055353 Zfp202Q8C879 641 aa16.87■□□□□ 0.29
Msx3-201ENSMUST00000055353 Ehd4Q9EQP2 541 aa16.87■□□□□ 0.29
Msx3-201ENSMUST00000055353 Dync1i1O88485 628 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Ftl2P49945 183 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Myl10Q62082 202 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Prkag3Q8BGM7 489 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Cnot6lQ8VEG6 555 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Gigyf1Q99MR1 1044 aaKnown RBP16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Dnajc25A2ALW5 357 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Lipo1J3QME6 396 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Surf1P09925 306 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Anks1aP59672 1150 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Pfkfb1P70266 471 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Fsd2Q8BZ52 692 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Stac3Q8BZ71 360 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Ciao1Q99KN2 339 aa16.86■□□□□ 0.29
Msx3-201ENSMUST00000055353 Tiam2Q6ZPF3 1715 aa16.85■□□□□ 0.29
Msx3-201ENSMUST00000055353 Tpcn2Q8BWC0 731 aa16.85■□□□□ 0.29
Msx3-201ENSMUST00000055353 DymQ8CHY3 669 aa16.85■□□□□ 0.29
Msx3-201ENSMUST00000055353 Mrc1Q61830 1456 aa16.85■□□□□ 0.29
Msx3-201ENSMUST00000055353 Ccng2O08918 344 aa16.85■□□□□ 0.29
Msx3-201ENSMUST00000055353 Cyp19a1P28649 503 aa16.85■□□□□ 0.29
Msx3-201ENSMUST00000055353 Clca2Q8BG22 942 aa16.85■□□□□ 0.29
Msx3-201ENSMUST00000055353 Samsn1P57725 372 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Gm12185Q5NCB2 835 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Appbp2Q9DAX9 585 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Telo2Q9DC40 840 aaKnown RBP16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Elf2Q9JHC9 593 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Acot9Q9R0X4 439 aaKnown RBP16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Carmil3Q3UFQ8 1375 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Tnrc6cQ3UHC0 1690 aaKnown RBP16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Grin2dQ03391 1323 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Cyp26a1O55127 497 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Ints4Q8CIM8 964 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Frat2Q8K025 231 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Nop2Q922K7 793 aaKnown RBP16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Tomm22Q9CPQ3 142 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Zeb2Q9R0G7 1215 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Vnn1Q9Z0K8 512 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 Cdc45Q9Z1X9 566 aa16.84■□□□□ 0.29
Msx3-201ENSMUST00000055353 CoblQ5NBX1 1337 aaKnown RBP16.83■□□□□ 0.28
Msx3-201ENSMUST00000055353 Gas2l3Q3UWW6 683 aa16.83■□□□□ 0.28
Msx3-201ENSMUST00000055353 Dnm3Q8BZ98 863 aa16.83■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms