RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Shisa4Q8CA71 197 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Filip1Q9CS72 1211 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Zfp142G5E869 1843 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Arap2Q8BZ05 1703 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Myd88P22366 296 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Tmem59lQ7TNI2 337 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 RgmbQ7TQ33 436 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Slc5a1Q8C3K6 665 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Rbm17Q8JZX4 405 aaKnown RBP18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Alg3Q8K2A8 438 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Fam50bQ9WTJ8 334 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Shank3Q4ACU6 1730 aa18.73■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Tpm1P58771 284 aa18.73■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Il17raQ60943 864 aa18.73■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 U2af1l4Q8BGJ9 220 aa18.73■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 CenpqQ9CPQ5 267 aa18.73■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Vmn2r23E9PXI5 849 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Sptlc2P97363 560 aaKnown RBP18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Stk38Q91VJ4 465 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Appbp2Q9DAX9 585 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Clic4Q9QYB1 253 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Pramel3A2AHA7 463 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Gm7903A2AWL1 463 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 AV320801A2AWL3 467 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Gm15023L7MUB4 467 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Trim56Q80VI1 734 aaKnown RBP18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 SdsQ8VBT2 327 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Rcan1Q9JHG6 198 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Cnpy2Q9QXT0 182 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Zkscan5Q9Z1D8 819 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 TnksQ6PFX9 1320 aa18.72■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Gm21663A0A0G2JE01 267 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Jakmip2D3YXK0 820 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Gm7361D3Z6R1 267 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 5031410I06RikE9Q4E0 267 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Gm1979E9QAN3 267 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Gm5862K7N5V5 267 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Gm10220K7N660 267 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 FosbP13346 338 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Myo1bP46735 1107 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Frat1P70339 274 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Cdc37Q61081 379 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Tpcn2Q8BWC0 731 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Alx1Q8C8B0 326 aa18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Luzp1Q8R4U7 1068 aaKnown RBP18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Hnrnpul1Q8VDM6 859 aaKnown RBP18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Kri1Q8VDQ9 704 aaKnown RBP18.71■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Gm20425E9Q035 978 aaKnown RBP18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 SrprbP47758 269 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 GnpatP98192 678 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Ints5Q8CHT3 1018 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Mylk2Q8VCR8 613 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Pcdhb22Q91XZ8 794 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Xpo4Q9ESJ0 1151 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Dctpp1Q9QY93 170 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Nek3Q9R0A5 511 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 TsksO54887 585 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Atp8a2P98200 1148 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Zfp91Q62511 572 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 IqcgQ80W32 419 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 CrebrfQ8CDG5 640 aaKnown RBP18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Odf2lQ9D478 642 aa18.7■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 PappaQ8R4K8 1624 aa18.69■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 DccP70211 1447 aa18.69■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Mtx1P47802 317 aa18.69■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Spty2d1Q68FG3 682 aa18.69■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Abcf1Q6P542 837 aaKnown RBP18.69■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Cep55Q8BT07 462 aa18.69■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Zfp202Q8C879 641 aa18.69■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Kcnq5Q9JK45 933 aa18.69■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 CpdO89001 1377 aa18.68■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Znf568E9PYI1 671 aa18.68■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Fam160b2Q80YR2 744 aa18.68■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Map10Q8BJS7 891 aa18.68■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Gpr108Q91WD0 569 aa18.68■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Lama4P97927 1816 aa18.68■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Plcb3P51432 1234 aaKnown RBP18.67■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Prkag3Q8BGM7 489 aa18.67■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Stxbp4Q9WV89 557 aa18.67■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Hps3Q91VB4 1002 aa18.67■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Chmp3Q9CQ10 224 aa18.67■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Tnrc6cQ3UHC0 1690 aaKnown RBP18.67■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Grin2dQ03391 1323 aa18.66■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Pfkfb1P70266 471 aa18.66■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 PsdQ5DTT2 1024 aa18.66■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Speer4bQ9D9F7 267 aa18.66■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Crb1Q8VHS2 1405 aa18.66■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Greb1lB9EJV3 1913 aa18.66■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Myo3bQ1EG27 1305 aa18.66■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Sycp2lA0A0M3U1B0 842 aa18.65■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Paxbp1P58501 919 aa18.65■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Ltv1Q6NSQ7 470 aaKnown RBP18.65■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Ube3bQ9ES34 1070 aa18.65■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Cyp3a59D3Z2W7 503 aa18.65■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Epb41l2O70318 988 aaKnown RBP18.65■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Zpr1Q62384 459 aa18.65■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Ulbp1Q8HWA3 334 aa18.65■□□□□ 0.58
Ttc39b-202ENSMUST00000048274 Myo1aO88329 1043 aa18.64■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Fbln2P37889 1221 aa18.64■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Ftl2P49945 183 aa18.64■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 109.2 ms