RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 RgmbQ7TQ33 436 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 4931400O07RikQ9D4M5 137 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Baiap2l1Q9DBJ3 514 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 FancaQ9JL70 1439 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Kif2cQ922S8 721 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 DonsonQ9QXP4 560 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Erbb3Q61526 1339 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ak9G3UYQ4 1894 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Nbr1P97432 988 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ppp1r9bQ6R891 817 aaKnown RBP9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 GlyctkQ8QZY2 523 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ccdc12Q8R344 166 aaKnown RBP9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 IqcgQ80W32 419 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Hdac9Q99N13 588 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Igbp1bQ9QZ29 343 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Klhl34A2AI76 644 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Zkscan7E9PVW1 718 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Usp25P57080 1055 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Pde3aQ9Z0X4 1141 aa9.96□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ddx27Q921N6 760 aaKnown RBP9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Zkscan16A2ALW2 728 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 PpardP35396 440 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Xrcc4Q924T3 326 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Armc3A2AU72 881 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ppp1r9aH3BJD6 1292 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 MarcksP26645 309 aaKnown RBP9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 PalldQ9ET54 1408 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Nap1l5Q9JJF0 156 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Cetn2Q9R1K9 172 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Dact3Q0PHV7 610 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Skor2A7M7C7 1008 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gm29094F6Q785 221 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Tom1l2Q5SRX1 507 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Efcc1Q9JJF6 558 aa9.96□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ssrp1Q08943 708 aaKnown RBP9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Enox2Q8R0Z2 598 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Emilin1Q99K41 1017 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 NpatQ8BMA5 1420 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Prpf40aQ9R1C7 953 aaKnown RBP9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Api5O35841 504 aaKnown RBP9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Prr16A3KMN5 304 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Cyp24a1Q64441 514 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ano1Q8BHY3 960 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ndufa8Q9DCJ5 172 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Eif4a1P60843 406 aaKnown RBP9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Epb41l2O70318 988 aaKnown RBP9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Vps41Q5KU39 853 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Arhgef2Q60875 985 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Vmn1r199Q8R280 367 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 AdpgkQ8VDL4 496 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Atf5O70191 283 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Atp1b3P97370 278 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Tbc1d5Q80XQ2 815 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gng11P61953 73 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Hs2st1Q8R3H7 356 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 RabggtaQ9JHK4 567 aa9.95□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Atg4a-psA0A0G2JFS9 396 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Cfap73J3QPZ5 306 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Eya2O08575 532 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Abcf1Q6P542 837 aaKnown RBP9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Atg4aQ8C9S8 396 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Dis3l2Q8CI75 870 aaKnown RBP9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Shtn1Q8K2Q9 631 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Cabp5Q9JLK3 173 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Depdc5P61460 1591 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Jade3Q6IE82 823 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ccdc93Q7TQK5 629 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Wdr17E9Q271 1322 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Syt1P46096 421 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Pus3Q9JI38 481 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Palm3A2TJV2 734 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Arhgef12Q8R4H2 1543 aaKnown RBP9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Iffo1Q8BXL9 562 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 AmfrQ9R049 643 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Uhrf1bp1lA2RSJ4 1457 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Galnt15Q9D2N8 638 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 DohhA0A1Y7VJ29 135 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Srgap1Q91Z69 1062 aa9.94□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Nucb1Q02819 459 aaKnown RBP9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ddx19aQ61655 478 aaKnown RBP9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Kif5bQ61768 963 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Exoc3Q6KAR6 755 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Brms1Q99N20 246 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 GancQ8BVW0 898 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Zbtb1Q91VL9 713 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Yeats2Q3TUF7 1407 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Trap1aP19473 224 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gbp1Q01514 589 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Tktl2Q9D4D4 627 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 LlphQ9D945 130 aaKnown RBP9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Csrnp1P59054 583 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Klhl30Q8C3F7 581 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Nxf1Q99JX7 618 aaKnown RBP9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Unc13aQ4KUS2 1712 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Myh10Q61879 1976 aaKnown RBP9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 1700029H14RikE9PY36 240 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Osbpl2Q8BX94 484 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ddx39aQ8VDW0 427 aaKnown RBP9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ccdc105Q9D4K7 499 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ktn1Q61595 1327 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms