RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Hand2Q61039 217 aa17.43■□□□□ 0.38
Nup54-201ENSMUST00000038514 Ift57Q8BXG3 429 aa17.43■□□□□ 0.38
Nup54-201ENSMUST00000038514 Ciao1Q99KN2 339 aa17.43■□□□□ 0.38
Nup54-201ENSMUST00000038514 Chmp3Q9CQ10 224 aa17.43■□□□□ 0.38
Nup54-201ENSMUST00000038514 Gm43638A0A0J9YU36 694 aa17.42■□□□□ 0.38
Nup54-201ENSMUST00000038514 Slain2Q8CI08 581 aa17.42■□□□□ 0.38
Nup54-201ENSMUST00000038514 Acsbg1Q99PU5 721 aa17.42■□□□□ 0.38
Nup54-201ENSMUST00000038514 Stard3nlQ9DCI3 235 aa17.42■□□□□ 0.38
Nup54-201ENSMUST00000038514 Sox30Q8CGW4 782 aa17.42■□□□□ 0.38
Nup54-201ENSMUST00000038514 Sipa1l3G3X9J0 1776 aa17.41■□□□□ 0.38
Nup54-201ENSMUST00000038514 Sik3Q6P4S6 1311 aa17.41■□□□□ 0.38
Nup54-201ENSMUST00000038514 Eif3bQ8JZQ9 803 aaKnown RBP17.41■□□□□ 0.38
Nup54-201ENSMUST00000038514 TnksQ6PFX9 1320 aa17.41■□□□□ 0.38
Nup54-201ENSMUST00000038514 Col3a1P08121 1464 aa17.41■□□□□ 0.38
Nup54-201ENSMUST00000038514 Bin1O08539 588 aaKnown RBP17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 MyclP10166 368 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Myd88P22366 296 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Gm28047Q3US59 414 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Mctp2Q5RJH2 878 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Dnm3Q8BZ98 863 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Nrxn3Q6P9K9 1571 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Gm21663A0A0G2JE01 267 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Gm7361D3Z6R1 267 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 5031410I06RikE9Q4E0 267 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Gm1979E9QAN3 267 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Gm5862K7N5V5 267 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Gm10220K7N660 267 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Zfp202Q8C879 641 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Ppp4r3bQ922R5 820 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Grin2dQ03391 1323 aa17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Tnrc6cQ3UHC0 1690 aaKnown RBP17.4■□□□□ 0.38
Nup54-201ENSMUST00000038514 Pfkfb1P70266 471 aa17.39■□□□□ 0.38
Nup54-201ENSMUST00000038514 L1td1Q587J6 782 aaKnown RBP17.39■□□□□ 0.38
Nup54-201ENSMUST00000038514 Kri1Q8VDQ9 704 aaKnown RBP17.39■□□□□ 0.38
Nup54-201ENSMUST00000038514 Filip1Q9CS72 1211 aa17.39■□□□□ 0.38
Nup54-201ENSMUST00000038514 Cyp3a57D3YYZ0 503 aa17.39■□□□□ 0.37
Nup54-201ENSMUST00000038514 Prkag3Q8BGM7 489 aa17.39■□□□□ 0.37
Nup54-201ENSMUST00000038514 Tpcn2Q8BWC0 731 aa17.39■□□□□ 0.37
Nup54-201ENSMUST00000038514 Slc5a1Q8C3K6 665 aa17.39■□□□□ 0.37
Nup54-201ENSMUST00000038514 Stxbp4Q9WV89 557 aa17.39■□□□□ 0.37
Nup54-201ENSMUST00000038514 Cdc37Q61081 379 aa17.38■□□□□ 0.37
Nup54-201ENSMUST00000038514 RgmbQ7TQ33 436 aa17.38■□□□□ 0.37
Nup54-201ENSMUST00000038514 Ehd2Q8BH64 543 aa17.38■□□□□ 0.37
Nup54-201ENSMUST00000038514 Ulbp1Q8HWA3 334 aa17.38■□□□□ 0.37
Nup54-201ENSMUST00000038514 Nbr1P97432 988 aa17.38■□□□□ 0.37
Nup54-201ENSMUST00000038514 Smc4Q8CG47 1286 aa17.38■□□□□ 0.37
Nup54-201ENSMUST00000038514 CoblQ5NBX1 1337 aaKnown RBP17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Jakmip2D3YXK0 820 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Dnajc5P60904 198 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Cep63Q3UPP8 700 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Cep55Q8BT07 462 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Sec62Q8BU14 398 aaKnown RBP17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 AbraQ8BUZ1 375 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 ImmtQ8CAQ8 757 aaKnown RBP17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Frat2Q8K025 231 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Ncoa5Q91W39 579 aaKnown RBP17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Ankrd1Q9CR42 319 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Fam213aQ9CYH2 218 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Large1Q9Z1M7 756 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Lama4P97927 1816 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Samsn1P57725 372 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Ddx17Q501J6 650 aaKnown RBP17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Map10Q8BJS7 891 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Mei4Q8BRM6 389 aa17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Ddx27Q921N6 760 aaKnown RBP17.37■□□□□ 0.37
Nup54-201ENSMUST00000038514 Shank3Q4ACU6 1730 aa17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 Ccdc121E9Q6D3 323 aa17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 Paxbp1P58501 919 aa17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 Ints5Q8CHT3 1018 aa17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 Speer4bQ9D9F7 267 aa17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 Appbp2Q9DAX9 585 aa17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 CpdO89001 1377 aa17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 Gm20425E9Q035 978 aaKnown RBP17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 SrprbP47758 269 aa17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 IncenpQ9WU62 880 aa17.36■□□□□ 0.37
Nup54-201ENSMUST00000038514 Usp13Q5BKP2 858 aa17.35■□□□□ 0.37
Nup54-201ENSMUST00000038514 Bcl9lQ67FY2 1494 aa17.35■□□□□ 0.37
Nup54-201ENSMUST00000038514 Slc1a4O35874 532 aa17.35■□□□□ 0.37
Nup54-201ENSMUST00000038514 ErmnQ5EBJ4 281 aa17.35■□□□□ 0.37
Nup54-201ENSMUST00000038514 Fsd2Q8BZ52 692 aa17.35■□□□□ 0.37
Nup54-201ENSMUST00000038514 Dhx8A2A4P0 1244 aaKnown RBP17.34■□□□□ 0.37
Nup54-201ENSMUST00000038514 H2afxP27661 143 aaKnown RBP17.34■□□□□ 0.37
Nup54-201ENSMUST00000038514 Zhx1P70121 873 aa17.34■□□□□ 0.37
Nup54-201ENSMUST00000038514 Arap2Q8BZ05 1703 aa17.34■□□□□ 0.37
Nup54-201ENSMUST00000038514 Acot9Q9R0X4 439 aaKnown RBP17.34■□□□□ 0.37
Nup54-201ENSMUST00000038514 Phlpp1Q8CHE4 1687 aa17.34■□□□□ 0.37
Nup54-201ENSMUST00000038514 Epha2Q03145 977 aa17.33■□□□□ 0.37
Nup54-201ENSMUST00000038514 Pcdhb14Q6PB90 796 aa17.33■□□□□ 0.37
Nup54-201ENSMUST00000038514 Kcnq3Q8K3F6 873 aa17.33■□□□□ 0.37
Nup54-201ENSMUST00000038514 Cnot6lQ8VEG6 555 aa17.33■□□□□ 0.37
Nup54-201ENSMUST00000038514 Nek3Q9R0A5 511 aa17.33■□□□□ 0.37
Nup54-201ENSMUST00000038514 Col18a1P39061 1774 aa17.33■□□□□ 0.37
Nup54-201ENSMUST00000038514 TsksO54887 585 aa17.33■□□□□ 0.36
Nup54-201ENSMUST00000038514 Acnat2Q8BGG9 420 aa17.33■□□□□ 0.36
Nup54-201ENSMUST00000038514 Fam43aQ8BUP8 424 aa17.33■□□□□ 0.36
Nup54-201ENSMUST00000038514 Rec8Q8C5S7 591 aa17.33■□□□□ 0.36
Nup54-201ENSMUST00000038514 Ttc19Q8CC21 365 aa17.33■□□□□ 0.36
Nup54-201ENSMUST00000038514 Dctpp1Q9QY93 170 aa17.33■□□□□ 0.36
Nup54-201ENSMUST00000038514 Vnn1Q9Z0K8 512 aa17.33■□□□□ 0.36
Nup54-201ENSMUST00000038514 Ccne2Q9Z238 404 aa17.33■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 117.8 ms