RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 U2af1l4Q8BGJ9 220 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Zkscan8Q8BSL0 588 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Nip7Q9CXK8 180 aaKnown RBP12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Clstn1Q9EPL2 979 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Tbc1d4Q8BYJ6 1307 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Ccdc162pQ0VG85 912 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Zbtb38Q3LR78 1197 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Acap3Q6NXL5 833 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Terf2ipQ91VL8 393 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Bmp2kQ91Z96 1138 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Atp8b3Q6UQ17 1335 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Atp2b1G5E829 1220 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Rgs9O54828 675 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Slfnl1Q8BHW9 410 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Shisa4Q8CA71 197 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Emilin1Q99K41 1017 aa12.42□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Cspp1B2RX88 1205 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Asap2Q7SIG6 958 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Ddx54Q8K4L0 874 aaKnown RBP12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 SdsQ8VBT2 327 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Clic4Q9QYB1 253 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Usp42B2RQC2 1324 aaKnown RBP12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Prl3d2F6R3P9 224 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Gpr182P43142 395 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Lrriq3Q14DL3 633 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 ZyxQ62523 564 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Tbc1d31Q6NXY1 996 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Ccdc38Q8CDN8 563 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Dusp10Q9ESS0 483 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Cfap157Q0VFX2 523 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Gm12185Q5NCB2 835 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Ehd2Q8BH64 543 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Irx4Q9QY61 515 aa12.41□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Ccdc112A0AUP1 442 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Gpatch3Q8BIY1 525 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Sec62Q8BU14 398 aaKnown RBP12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Golph3lQ8R088 285 aaKnown RBP12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Golgb1E9PVZ8 3238 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Pramel3A2AHA7 463 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Gm7903A2AWL1 463 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 AV320801A2AWL3 467 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Oas2E9Q9A9 742 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Gm15023L7MUB4 467 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Trap1aP19473 224 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Ftl2P49945 183 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Exosc10P56960 887 aaKnown RBP12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 GscQ02591 256 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Kiaa0754Q69ZZ9 979 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 DymQ8CHY3 669 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Mical1Q8VDP3 1048 aa12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Tjp1P39447 1745 aaKnown RBP12.4□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Sass6Q80UK7 654 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Nop14Q8R3N1 860 aaKnown RBP12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Stk38Q91VJ4 465 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Smarcc2Q6PDG5 1213 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Acnat2Q8BGG9 420 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Gimap5Q8BWF2 308 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Cnot6lQ8VEG6 555 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 BrapQ99MP8 591 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Cfap99A0A140LIX9 648 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Nucb2P81117 420 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 CtcfQ61164 736 aaKnown RBP12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Edrf1Q6GQV7 1239 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Tsen34Q8BMZ5 316 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Cep55Q8BT07 462 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Fsd2Q8BZ52 692 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Mtmr3Q8K296 1196 aa12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Lrrc59Q922Q8 307 aaKnown RBP12.39□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Cdkn1cP49919 348 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Tshz1Q5DTH5 1084 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 TsksO54887 585 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Cyp2d9P11714 504 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Cyp19a1P28649 503 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Ccdc34Q3UI66 367 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Pram1Q6BCL1 675 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Tmem59lQ7TNI2 337 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Fam102bQ8BQS4 339 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Tmem266Q8BZB3 538 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Atad2Q8CDM1 1040 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Tubb6Q922F4 447 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Rdm1Q9CQK3 281 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Osbpl5Q9ER64 874 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Hmgn5Q9JL35 406 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Sos2Q02384 1333 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Aox4Q3TYQ9 1336 aa12.38□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Card6E9PWH2 1175 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Gabpb2P81069 414 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 LyarQ08288 388 aaKnown RBP12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Clca2Q8BG22 942 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Map10Q8BJS7 891 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Nlrp3Q8R4B8 1033 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Snw1Q9CSN1 536 aaKnown RBP12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Popdc2Q9ES82 367 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Marf1Q8BJ34 1730 aaKnown RBP12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 RdxP26043 583 aaKnown RBP12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Gas2l3Q3UWW6 683 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Pla2g4fQ50L41 855 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Cyp7a1Q64505 503 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Col4a3bpQ9EQG9 624 aa12.37□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Ank1Q02357 1862 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms