RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Asic1Q6NXK8 526 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Kdm1aQ6ZQ88 853 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Sh3d21Q7TSG5 549 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Rbm5Q91YE7 815 aaKnown RBP11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Sos2Q02384 1333 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gm16486A0A1D5RMD1 1434 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Klhl34A2AI76 644 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gm5624F6ZZG8 207 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Vwa3bJ9JI28 736 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 CltaO08585 235 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Afap1Q80YS6 731 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Izumo3A6PWV3 263 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cdr1E9Q0B4 517 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gjc1P28229 396 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Sem1P60897 70 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gbp7Q91Z40 638 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Erich3F6QRE9 1637 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Atg4a-psA0A0G2JFS9 396 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gpr161B2RPY5 545 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Myo1aO88329 1043 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Atg4aQ8C9S8 396 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Efcc1Q9JJF6 558 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Plb1Q3TTY0 1478 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Mrc2Q64449 1479 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gas2l2Q5SSG4 860 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Pdlim2Q8R1G6 349 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cdk13Q69ZA1 1511 aaKnown RBP11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 MarcksP26645 309 aaKnown RBP11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Wdr24Q8CFJ9 790 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Card14Q99KF0 999 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Naa16Q9DBB4 864 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Calml3Q9D6P8 149 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Tmco5aQ9D9D5 303 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Diaph2O70566 1098 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Arhgap24Q8C4V1 747 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Rtn1Q8K0T0 780 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 JmyQ9QXM1 983 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cacna2d3Q9Z1L5 1091 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gnat2P50149 354 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Stmn2P55821 179 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 EnahQ03173 802 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Triml1Q8BVP1 470 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Zbtb3Q91X45 518 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Atg3Q9CPX6 314 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Wdr62Q3U3T8 1523 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gm5934D3Z4U6 212 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Actn3O88990 900 aaKnown RBP11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Plekho1Q9JIY0 408 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gkap1Q9JMB0 366 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Lmtk2Q3TYD6 1471 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Psmb7P70195 277 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Matr3Q8K310 846 aaKnown RBP11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Dhx30Q99PU8 1217 aaKnown RBP11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Itgb1bp2Q9R000 350 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Taf7Q9R1C0 341 aa11.41□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Fancd2Q80V62 1450 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Atp8b1Q148W0 1251 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gngt1Q61012 74 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Sar1bQ9CQC9 198 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Csrnp1P59054 583 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cracr2aQ3UP38 310 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Oxsr1Q6P9R2 527 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Prpf40bQ80W14 870 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Kif2bQ8C0N1 668 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ppp2r3dQ9Z176 491 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Eef1dP57776 281 aaKnown RBP11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Kdm3bQ6ZPY7 1562 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Taok1Q5F2E8 1001 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Zranb1Q7M760 708 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ppp2r2cQ8BG02 447 aa11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Surf6P70279 355 aaKnown RBP11.4□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ess2O70279 479 aa11.4□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ranbp6Q8BIV3 1105 aa11.4□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Sec62Q8BU14 398 aaKnown RBP11.4□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Plcb1Q9Z1B3 1216 aa11.4□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Adgrl2Q8JZZ7 1487 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 B4galnt4Q766D5 1034 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 SltmQ8CH25 1031 aaKnown RBP11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Kcnk13Q8R1P5 405 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Hdac9Q99N13 588 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 NgdnQ9DB96 315 aaKnown RBP11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Cep128Q8BI22 1102 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Larp6Q8BN59 492 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 LgsnQ8CIX8 563 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Hexim1Q8R409 356 aaKnown RBP11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Pcdhb22Q91XZ8 794 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ripk4Q9ERK0 786 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Becn2P0DM65 447 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Plcb3P51432 1234 aaKnown RBP11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Lig3P97386 1015 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Cfap100Q80VN0 613 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ddx41Q91VN6 622 aaKnown RBP11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ifi35Q9D8C4 286 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ccdc89Q9DA73 370 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Gm5935Q497S0 212 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Rbm12b2Q66JV4 834 aaKnown RBP11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Krit1Q6S5J6 736 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Tsr2Q8C8T8 191 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 IqcdQ9D3V1 458 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Nxf2Q4ZGD8 691 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms