RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Tmem94Q7TSH8 1360 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Cnksr1A2A9K7 700 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Ccdc82Q6PG04 518 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Exoc8Q6PGF7 716 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Nxf7Q80SZ6 620 aaKnown RBP14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Ppfibp1Q8C8U0 969 aaKnown RBP14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Eif3cQ8R1B4 911 aaKnown RBP14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Card14Q99KF0 999 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Gm43638A0A0J9YU36 694 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Irgm2A0A140LIF8 407 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Vsnl1P62761 191 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Desi2Q9D291 194 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Large1Q9Z1M7 756 aa14.19□□□□□ -0.14
Trim23-201ENSMUST00000022225 Pola2P33611 600 aa14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 PsapQ61207 557 aaKnown RBP14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 Cdc23Q8BGZ4 597 aa14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 PpanQ91YU8 470 aaKnown RBP14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 Mkrn1Q9QXP6 481 aa14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 C2cd2E9Q3C1 696 aa14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 ItgadQ3V0T4 1168 aa14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 Edc3Q8K2D3 508 aaKnown RBP14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 HnrnpmQ9D0E1 729 aaKnown RBP14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 Cep83Q9D5R3 692 aa14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 Nup153E9Q3G8 1462 aaKnown RBP14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 Wnk3Q80XP9 1757 aa14.18□□□□□ -0.14
Trim23-201ENSMUST00000022225 Ppfia3P60469 1194 aa14.17□□□□□ -0.14
Trim23-201ENSMUST00000022225 Ppp1r7Q3UM45 361 aa14.17□□□□□ -0.14
Trim23-201ENSMUST00000022225 Pwp2Q8BU03 919 aaKnown RBP14.17□□□□□ -0.14
Trim23-201ENSMUST00000022225 Stk38Q91VJ4 465 aa14.17□□□□□ -0.14
Trim23-201ENSMUST00000022225 Parp14Q2EMV9 1817 aa14.17□□□□□ -0.14
Trim23-201ENSMUST00000022225 Tnnt1O88346 262 aa14.17□□□□□ -0.14
Trim23-201ENSMUST00000022225 ItpripQ3TNL8 555 aa14.17□□□□□ -0.14
Trim23-201ENSMUST00000022225 Kiaa0232Q80U59 1396 aaKnown RBP14.17□□□□□ -0.14
Trim23-201ENSMUST00000022225 Pfkfb1P70266 471 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Cdr2P97817 455 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Ppp1r1bQ60829 194 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Fchsd1Q6PFY1 688 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Hip1rQ9JKY5 1068 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Myo1bP46735 1107 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Cct2P80314 535 aaKnown RBP14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Sptlc2P97363 560 aaKnown RBP14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Exoc5Q3TPX4 708 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Tc2nQ91XT6 489 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Prpf6Q91YR7 941 aaKnown RBP14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Yeats4Q9CR11 227 aaKnown RBP14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 SyncQ9EPM5 470 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 C5P06684 1680 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Map3k13Q1HKZ5 959 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Rnf40Q3U319 1001 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Asnsd1Q8BFS9 627 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Wdr17E9Q271 1322 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 NalcnQ8BXR5 1738 aa14.16□□□□□ -0.14
Trim23-201ENSMUST00000022225 Hnrnph2P70333 449 aaKnown RBP14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Washc4Q3UMB9 1173 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Kiaa1211Q5PR69 1207 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Klhl30Q8C3F7 581 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Smc2Q8CG48 1191 aaKnown RBP14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Slc26a8Q8R0C3 999 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Znrd1-asQ8R0E5 213 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Osbpl1aQ91XL9 950 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Rrp1bQ91YK2 724 aaKnown RBP14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Ehd4Q9EQP2 541 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Astn2Q80Z10 1352 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Hnrnph1O35737 449 aaKnown RBP14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Atp6v1aP50516 617 aaKnown RBP14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Q32P12 615 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 LbrQ3U9G9 626 aaKnown RBP14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Usp44Q8C2S0 711 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 MbipQ99LQ1 341 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 BrapQ99MP8 591 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 PhaxQ9JJT9 385 aaKnown RBP14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 SufuQ9Z0P7 484 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Tubb4bP68372 445 aaKnown RBP14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Cct5P80316 541 aaKnown RBP14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Cd37Q61470 281 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Erlin2Q8BFZ9 340 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Nek11Q8C0Q4 628 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Usp27Q8CEG8 438 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Calcoco1Q8CGU1 691 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Rhot2Q8JZN7 620 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 BaatQ91X34 420 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Vnn1Q9Z0K8 512 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Mst1rQ62190 1378 aa14.15□□□□□ -0.14
Trim23-201ENSMUST00000022225 Ccdc33Q3ULW6 985 aa14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 Srek1Q8BZX4 494 aaKnown RBP14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 Hgh1Q8C3I8 393 aa14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ccdc158Q8CDI6 1109 aa14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 Gm6588E9Q3K0 461 aa14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 Akap2O54931 893 aa14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 LyarQ08288 388 aaKnown RBP14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ddx58Q6Q899 926 aa14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ptcd1Q8C2E4 695 aaKnown RBP14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 Echdc1Q9D9V3 322 aa14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ptpn23Q6PB44 1692 aa14.14□□□□□ -0.15
Trim23-201ENSMUST00000022225 NpcdF8VQB8 469 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ets1P27577 440 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Eya1P97767 591 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Lrrfip2Q91WK0 415 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Folh1O35409 752 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Tubb2aQ7TMM9 445 aa14.13□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms