RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Mrps9Q9D7N3 390 aaKnown RBP10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Rab3gap2Q8BMG7 1366 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ccdc191J3QQ27 883 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Cep120Q7TSG1 988 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Wdr24Q8CFJ9 790 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 P3h4Q8K2B0 443 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Stk38Q91VJ4 465 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Gbp2Q9Z0E6 589 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 InsrP15208 1372 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Zc3h13E9Q784 1729 aaKnown RBP10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Cct2P80314 535 aaKnown RBP10.52□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Atp11aP98197 1187 aa10.52□□□□□ -0.72
Ctc1-201ENSMUST00000021278 NntQ61941 1086 aaKnown RBP10.52□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Kiaa1524Q8BWY9 907 aa10.52□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Zkscan16A2ALW2 728 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 C2cd2E9Q3C1 696 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Diaph1O08808 1255 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Zmym1Q3TJB1 983 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Slc4a10Q5DTL9 1118 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Efcab14Q8BGQ6 484 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Noc3lQ8VI84 807 aaKnown RBP10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Sirt1Q923E4 737 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Calr3Q9D9Q6 380 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 CltaO08585 235 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Pafah1b1P63005 410 aaKnown RBP10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ddx19aQ61655 478 aaKnown RBP10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ddx58Q6Q899 926 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Fam53cQ8BXQ8 393 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Stk31Q99MW1 1018 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ybx3Q9JKB3 361 aaKnown RBP10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Uts2Q9QZQ3 123 aa10.52□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Zdhhc9P59268 364 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Capza3P70190 299 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Agbl1Q09M05 972 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 AmotQ8VHG2 1126 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Creld2Q9CYA0 350 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Exosc9Q9JHI7 438 aaKnown RBP10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Snx1Q9WV80 522 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Cdk13Q69ZA1 1511 aaKnown RBP10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ttc13A0A1L1SSC7 844 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Cep131Q62036 1060 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 TxlnaQ6PAM1 554 aaKnown RBP10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 4921504E06RikQ8CET2 560 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tubb4aQ9D6F9 444 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 DesP31001 469 aaKnown RBP10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Top1Q04750 767 aaKnown RBP10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Hook3Q8BUK6 718 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tsr2Q8C8T8 191 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tekt2Q922G7 430 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 FanclQ9CR14 375 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Cfap53Q9D439 514 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 LlphQ9D945 130 aaKnown RBP10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Gm21671G3UY31 267 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Impdh2P24547 514 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 TchpQ3TVW5 497 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Wdr93Q402B2 695 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ankrd40Q5SUE8 363 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Klhl23Q6GQU2 558 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Dnm3Q8BZ98 863 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Rhot2Q8JZN7 620 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Orc1Q9Z1N2 840 aaKnown RBP10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Itsn1Q9Z0R4 1714 aa10.51□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Strn4P58404 760 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Specc1lQ2KN98 1118 aaKnown RBP10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Cand2Q6ZQ73 1235 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 LgsnQ8CIX8 563 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Filip1Q9CS72 1211 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Slc5a4aQ9ET37 656 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Gprasp1Q5U4C1 1347 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Dnajc25A2ALW5 357 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Traf3ip3Q8C0G2 513 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Bcar3Q9QZK2 820 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Sf3b2Q3UJB0 878 aaKnown RBP10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Vps41Q5KU39 853 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Serpinb6Q60854 378 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Spata16Q8C636 571 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 CntrobQ8CB62 887 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Krt222Q8CCX5 294 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Bcl2l12Q9D3J3 255 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Rabgef1Q9JM13 491 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Stxbp4Q9WV89 557 aa10.5□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tubgcp6G5E8P0 1769 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Lmnb1P14733 588 aaKnown RBP10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Mum1l1Q4VA55 681 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Wdr44Q6NVE8 915 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Stk38lQ7TSE6 464 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Mei4Q8BRM6 389 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Brd3Q8K2F0 726 aaKnown RBP10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Krt82Q99M74 516 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Desi2Q9D291 194 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Iqgap3F8VQ29 1632 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 PrxO55103 1391 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tspyl3Q3UYP3 334 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Anapc5Q8BTZ4 740 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Arl8aQ8VEH3 186 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Xpo4Q9ESJ0 1151 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Kif5aP33175 1027 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Abcd1P48410 736 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Emilin2Q8K482 1074 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Kcnk13Q8R1P5 405 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms