RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Ifit2Q64112 472 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Triml1Q8BVP1 470 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ube3bQ9ES34 1070 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Cul9Q80TT8 1865 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Fbxo2Q80UW2 297 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Mrps27Q8BK72 415 aaKnown RBP9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Lrrfip2Q91WK0 415 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Hdgfl1Q2VPR5 283 aa9.21□□□□□ -0.93
Lig3-201ENSMUST00000021039 Col16a1Q8BLX7 1580 aa9.21□□□□□ -0.93
Lig3-201ENSMUST00000021039 Brwd3A2AHJ4 1799 aa9.21□□□□□ -0.93
Lig3-201ENSMUST00000021039 Rad23bP54728 416 aa9.21□□□□□ -0.93
Lig3-201ENSMUST00000021039 Asap2Q7SIG6 958 aa9.21□□□□□ -0.93
Lig3-201ENSMUST00000021039 Sil1Q9EPK6 465 aa9.21□□□□□ -0.93
Lig3-201ENSMUST00000021039 Pde4aO89084 844 aa9.21□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tbc1d8bA3KGB4 1114 aa9.21□□□□□ -0.94
Lig3-201ENSMUST00000021039 Glrx3Q9CQM9 337 aa9.21□□□□□ -0.94
Lig3-201ENSMUST00000021039 Adamtsl3G3UXC7 1706 aa9.21□□□□□ -0.94
Lig3-201ENSMUST00000021039 Apba2P98084 750 aa9.21□□□□□ -0.94
Lig3-201ENSMUST00000021039 B4galnt4Q766D5 1034 aa9.21□□□□□ -0.94
Lig3-201ENSMUST00000021039 Iqca1Q9CUL5 857 aa9.21□□□□□ -0.94
Lig3-201ENSMUST00000021039 HmmrQ00547 794 aaKnown RBP9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Fam170aQ66LM6 333 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tbc1d5Q80XQ2 815 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Chaf1aQ9QWF0 911 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Parp14Q2EMV9 1817 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tpx2A2APB8 745 aaKnown RBP9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 AK157302I3ITR1 129 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 LyarQ08288 388 aaKnown RBP9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Pdzrn3Q69ZS0 1063 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Lmbrd2Q8C561 694 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Mrpl44Q9CY73 333 aaKnown RBP9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Cep89Q9CZX2 791 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Isca1Q9D924 129 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Rlbp1Q9Z275 317 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Slit1Q80TR4 1531 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Samd1D3YXK1 519 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Api5O35841 504 aaKnown RBP9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Fkbp1aP26883 108 aaKnown RBP9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Mex3cQ05A36 652 aaKnown RBP9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 DymQ8CHY3 669 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Gtf3c5Q8R2T8 520 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 McamQ8R2Y2 648 aaKnown RBP9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Hps4Q99KG7 671 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Sycp1Q62209 993 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ercc6lQ8BHK9 1240 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Pcdhb22Q91XZ8 794 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Rnaseh2aQ9CWY8 301 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Hmgn5Q9JL35 406 aa9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Chd2E9PZM4 1827 aaKnown RBP9.2□□□□□ -0.94
Lig3-201ENSMUST00000021039 Atp6v0a2P15920 856 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ipo4Q8VI75 1082 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Trim11Q99PQ2 467 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Mtmr2Q9Z2D1 643 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 GabrdP22933 449 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Traf1P39428 409 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 CalcaP70160 136 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 SltmQ8CH25 1031 aaKnown RBP9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Eid1Q9DCR4 169 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Flt4P35917 1363 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Msh6P54276 1358 aaKnown RBP9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Spire2Q8K1S6 718 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Hs2st1Q8R3H7 356 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 NyxP83503 476 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Samm50Q8BGH2 469 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Bag4Q8CI61 457 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ampd3O08739 766 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Rbm19Q8R3C6 952 aaKnown RBP9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Taf5lQ91WQ5 589 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Znf541Q0GGX2 1363 aa9.19□□□□□ -0.94
Lig3-201ENSMUST00000021039 Kmt5bQ3U8K7 883 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Magea6O89010 325 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ca8P28651 291 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Stat5bP42232 786 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Lrrfip1Q3UZ39 729 aaKnown RBP9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Magea3Q6T340 320 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ppp1r10Q80W00 888 aaKnown RBP9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Bloc1s2Q9CWG9 143 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 FliiQ9JJ28 1271 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Homer1Q9Z2Y3 366 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Flt1P35969 1333 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Npc1l1Q6T3U4 1333 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 A0A0U1RNP2 1173 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 VrtnQ3SYK4 740 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Necab1Q8BG18 352 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Wdr78E9PYY5 807 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Znf667Q2TL60 609 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Kank4Q6P9J5 1016 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 AsnsQ61024 561 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Fnbp4Q6ZQ03 1031 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Amigo3Q8C2S7 508 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 4930504O13RikQ8C5Z9 145 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Bst2Q8R2Q8 172 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ccdc96Q9CR92 584 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Trip6Q9Z1Y4 480 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Arap3Q8R5G7 1538 aa9.18□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tbc1d4Q8BYJ6 1307 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Stim1P70302 685 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Pdzph1Q8BGR1 1238 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 4930523C07RikE9Q2T4 99 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 LdhaP06151 332 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms