RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Stk38Q91VJ4 465 aa21.83■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Yeats4Q9CR11 227 aaKnown RBP21.83■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 DccP70211 1447 aa21.83■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Ccng2O08918 344 aa21.83■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cep55Q8BT07 462 aa21.83■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Ccne2Q9Z238 404 aa21.83■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Nav1Q8CH77 1875 aa21.83■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Zscan29E9Q5B4 869 aa21.82■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Hap1O35668 628 aa21.82■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Igflr1Q3U4N7 345 aa21.82■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Kiaa0754Q69ZZ9 979 aa21.82■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Fam13bQ8K2H3 851 aa21.82■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Hps3Q91VB4 1002 aa21.82■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Atp2b3Q0VF55 1220 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Nol10Q5RJG1 687 aaKnown RBP21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Tpcn2Q8BWC0 731 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Amigo3Q8C2S7 508 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Dync1i1O88485 628 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Atp8a2P98200 1148 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cers3Q1A3B0 383 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cep63Q3UPP8 700 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 ErmnQ5EBJ4 281 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Fam160b2Q80YR2 744 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Zkscan8Q8BSL0 588 aa21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Nop2Q922K7 793 aaKnown RBP21.81■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Crb1Q8VHS2 1405 aa21.8■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Card6E9PWH2 1175 aa21.8■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Sptlc2P97363 560 aaKnown RBP21.8■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 TfrcQ62351 763 aaKnown RBP21.8■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Gm43638A0A0J9YU36 694 aa21.8■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Gm28047Q3US59 414 aa21.8■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Itga6Q61739 1091 aa21.8■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Edrf1Q6GQV7 1239 aa21.8■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Greb1lB9EJV3 1913 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cyp19a1P28649 503 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Plcb3P51432 1234 aaKnown RBP21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Ap5z1Q3U829 807 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Adam1aQ60813 791 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Tmem87aQ8BXN9 555 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Fsd2Q8BZ52 692 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Rgs12Q8CGE9 1381 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Gpr182P43142 395 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cep135Q6P5D4 1140 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Slx1bQ8BX32 270 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Kcnq3Q8K3F6 873 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Luzp1Q8R4U7 1068 aaKnown RBP21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cap2Q9CYT6 476 aa21.79■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Gm20425E9Q035 978 aaKnown RBP21.78■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 SrprbP47758 269 aa21.78■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cnot6lQ8VEG6 555 aa21.78■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Kcnq5Q9JK45 933 aa21.78■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cyp2d9P11714 504 aa21.77■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cadps2Q8BYR5 1297 aa21.77■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Rapgef3Q8VCC8 918 aa21.77■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Anxa1P10107 346 aaKnown RBP21.77■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Anks1aP59672 1150 aa21.77■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 BcanQ61361 883 aa21.77■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Alx1Q8C8B0 326 aa21.77■■□□□ 1.08
Shkbp1-201ENSMUST00000003857 Cbx1P83917 185 aaKnown RBP21.76■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Gnl3lQ6PGG6 577 aaKnown RBP21.76■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 GptQ8QZR5 496 aa21.76■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Pcdhb22Q91XZ8 794 aa21.76■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 CpdO89001 1377 aa21.76■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Prkag3Q8BGM7 489 aa21.76■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Kiaa1524Q8BWY9 907 aa21.76■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Emilin1Q99K41 1017 aa21.76■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Acsbg1Q99PU5 721 aa21.76■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Kcnd1Q03719 651 aa21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Il17raQ60943 864 aa21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Zfp202Q8C879 641 aa21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Odf2lQ9D478 642 aa21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Xpo4Q9ESJ0 1151 aa21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Pcdh10E9PXQ7 1057 aa21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 U2af2P26369 475 aaKnown RBP21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 HdgfP51859 237 aaKnown RBP21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Smg7Q5RJH6 1138 aaKnown RBP21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Zfp397Q7TNK4 527 aa21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Otud6bQ8K2H2 294 aa21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Gigyf1Q99MR1 1044 aaKnown RBP21.75■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Pfkfb1P70266 471 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Frat1P70339 274 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Ube3bQ9ES34 1070 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Cyp3a59D3Z2W7 503 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Surf1P09925 306 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Mtx1P47802 317 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Nlrp9aQ66X03 949 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Kiaa0753Q6A000 959 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Fbxo2Q80UW2 297 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Sec62Q8BU14 398 aaKnown RBP21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Sox30Q8CGW4 782 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Stxbp4Q9WV89 557 aa21.74■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Pcdhb9E9Q5G2 828 aa21.73■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Ccnl1Q52KE7 532 aaKnown RBP21.73■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 ZgpatQ8VDM1 511 aa21.73■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Creld2Q9CYA0 350 aa21.73■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Lama4P97927 1816 aa21.73■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Bin1O08539 588 aaKnown RBP21.73■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 FAM186AQ9D9R9 1790 aa21.72■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Lipo1J3QME6 396 aa21.72■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Nfatc2ipO09130 412 aa21.72■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms