RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 MRPS28Q9Y2Q9 187 aaKnown RBP13.47□□□□□ -0.25
COLCA2-206ENST00000638573 SF3B6Q9Y3B4 125 aaKnown RBP13.47□□□□□ -0.25
COLCA2-206ENST00000638573 A0A1W2PQ09 198 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 CDRT1O95170 752 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 HTR3BO95264 441 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 CALRP27797 417 aaKnown RBP13.46□□□□□ -0.25
COLCA2-206ENST00000638573 DUSP1P28562 367 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 FABP5Q01469 135 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 GPR176Q14439 515 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 AWAT2Q6E213 333 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 ELP2Q6IA86 826 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 TMEM91Q6ZNR0 172 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 UQCC2Q9BRT2 126 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 DCTN5Q9BTE1 182 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 ZNF696Q9H7X3 374 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 SEBOXQ9HB31 216 aaPredicted RBP13.46□□□□□ -0.25
COLCA2-206ENST00000638573 IL36GQ9NZH8 169 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 IL36RNQ9UBH0 155 aa13.46□□□□□ -0.25
COLCA2-206ENST00000638573 TRBV23-1A0A0A0MS06 115 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 RNASEK-C17orf49H0YIS7 233 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 TK1P04183 234 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 ZNF44P15621 663 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 SERPINA2P20848 420 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 GALP22466 123 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 GABRR1P24046 479 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 MYL9P24844 172 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 PAX6P26367 422 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 KRTAP10-3P60369 221 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 SYT6Q5T7P8 510 aaPredicted RBP13.45□□□□□ -0.26
COLCA2-206ENST00000638573 ASCL4Q6XD76 172 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 GDPD3Q7L5L3 318 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 CMTM4Q8IZR5 234 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 KIR3DL3Q8N743 410 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 OR5D13Q8NGL4 314 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 OR10K1Q8NGX5 313 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 C17orf50Q8WW18 174 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 SNX22Q96L94 193 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 NR1H4Q96RI1 486 aaPredicted RBP13.45□□□□□ -0.26
COLCA2-206ENST00000638573 ZMAT3Q9HA38 289 aaKnown RBP13.45□□□□□ -0.26
COLCA2-206ENST00000638573 C1RLQ9NZP8 487 aa13.45□□□□□ -0.26
COLCA2-206ENST00000638573 TRDV1A0A1B0GX56 115 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 A0A1W2PPH5 198 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 K7N7A8 449 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 SIRPB1O00241 398 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 GTF2F2P13984 249 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 RANBP1P43487 201 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 ERVFRD-1P60508 538 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 SCN1BQ07699 218 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 IL13RA2Q14627 380 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 SLC22A6Q4U2R8 563 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 GLIPR1L1Q6UWM5 242 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 LRRTM1Q86UE6 522 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 FAM185AQ8N0U4 392 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 OR8H2Q8N162 312 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 OSR2Q8N2R0 312 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 CHST4Q8NCG5 386 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 DMRTB1Q96MA1 342 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 STUB1Q9UNE7 303 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 SSR3Q9UNL2 185 aa13.44□□□□□ -0.26
COLCA2-206ENST00000638573 MEX3AA1L020 520 aaKnown RBP13.43□□□□□ -0.26
COLCA2-206ENST00000638573 PDCD5O14737 125 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 DEGS1O15121 323 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 OR2H2O95918 312 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 PSMD7P51665 324 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 GP2P55259 537 aaKnown RBP13.43□□□□□ -0.26
COLCA2-206ENST00000638573 EDDM3BP56851 147 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 RPL31P62899 125 aaKnown RBP13.43□□□□□ -0.26
COLCA2-206ENST00000638573 PDCD1Q15116 288 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 GRK1Q15835 563 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 CD200R1LQ6Q8B3 271 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 SHISA2Q6UWI4 295 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 OR4D6Q8NGJ1 314 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 C8orf46Q8TAG6 207 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 TBC1D15Q8TC07 691 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 TNFRSF14Q92956 283 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 PPIL3Q9H2H8 161 aaKnown RBP13.43□□□□□ -0.26
COLCA2-206ENST00000638573 PLGRKTQ9HBL7 147 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 C19orf12Q9NSK7 152 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 GHRLQ9UBU3 117 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 ST3GAL6Q9Y274 331 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 KPTNQ9Y664 436 aa13.43□□□□□ -0.26
COLCA2-206ENST00000638573 WIPF1O43516 503 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 ZNF737O75373 536 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 UBBP0CG47 229 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 RAG2P55895 527 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 BLMHQ13867 455 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 EDDM3AQ14507 147 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 TAF9Q16594 264 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 HIST2H2BDQ6DRA6 164 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 HCP5Q6MZN7 132 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 LINC00596Q86U02 117 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 Q8NFD4 153 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 OR51T1Q8NGJ9 327 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 OR6M1Q8NGM8 313 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 SGMS2Q8NHU3 365 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 MRPS24Q96EL2 167 aaKnown RBP13.42□□□□□ -0.26
COLCA2-206ENST00000638573 CHST6Q9GZX3 395 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 CST11Q9H112 138 aa13.42□□□□□ -0.26
COLCA2-206ENST00000638573 TMEM82A0PJX8 343 aa13.41□□□□□ -0.26
COLCA2-206ENST00000638573 FUOMA2VDF0 154 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms