RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SUPT4H1P63272 117 aaKnown RBP14.96□□□□□ -0.01
CNOT3-209ENST00000617930 PPA1Q15181 289 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 ALKBH6Q3KRA9 238 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 TMEM128Q5BJH2 165 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 C5orf24Q7Z6I8 188 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 BPIFCQ8NFQ6 507 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 NANOS1Q8WY41 292 aaKnown RBP14.96□□□□□ -0.01
CNOT3-209ENST00000617930 LRRC46Q96FV0 321 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 NMES1Q9C002 83 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 ASF1BQ9NVP2 202 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 PRR14LQ5THK1 2151 aa14.96□□□□□ -0.02
CNOT3-209ENST00000617930 TRIM77I1YAP6 450 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 SMPD2O60906 423 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 AGFG2O95081 481 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 FCGR3AP08637 254 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 PGAM2P15259 253 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 COX5AP20674 150 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 GLRA1P23415 457 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 CYCSP99999 105 aaKnown RBP14.95□□□□□ -0.02
CNOT3-209ENST00000617930 ARL6IP1Q15041 203 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 UNQ6494/PRO21346Q6UXR6 183 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 STARD4Q96DR4 205 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 ZNF488Q96MN9 340 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 ZGRF1Q86YA3 2104 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 NBEAQ8NFP9 2946 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 AHRRA9YTQ3 701 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 SIGLEC5O15389 551 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 RPS2P15880 293 aaKnown RBP14.95□□□□□ -0.02
CNOT3-209ENST00000617930 CA6P23280 308 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 TAS2R46P59540 309 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 SLC9A3R2Q15599 337 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 CHRFAM7AQ494W8 412 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 NSUN5P2Q63ZY6 315 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 ATRAIDQ6UW56 229 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 ZNF610Q8N9Z0 462 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 OR5A2Q8NGI9 324 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 SCGB3A2Q96PL1 93 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 CMSS1Q9BQ75 279 aaKnown RBP14.95□□□□□ -0.02
CNOT3-209ENST00000617930 OR2J1Q9GZK6 312 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 PIGMQ9H3S5 423 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 PLSCR4Q9NRQ2 329 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 ANXA10Q9UJ72 324 aa14.95□□□□□ -0.02
CNOT3-209ENST00000617930 KCNAB3O43448 404 aa14.94□□□□□ -0.02
CNOT3-209ENST00000617930 PDCD6O75340 191 aa14.94□□□□□ -0.02
CNOT3-209ENST00000617930 SFT2D2O95562 160 aa14.94□□□□□ -0.02
CNOT3-209ENST00000617930 CRYABP02511 175 aaKnown RBP14.94□□□□□ -0.02
CNOT3-209ENST00000617930 TPT1P13693 172 aaKnown RBP14.94□□□□□ -0.02
CNOT3-209ENST00000617930 CTRB1P17538 263 aa14.94□□□□□ -0.02
CNOT3-209ENST00000617930 FPR2P25090 351 aa14.94□□□□□ -0.02
CNOT3-209ENST00000617930 UCNP55089 124 aa14.94□□□□□ -0.02
CNOT3-209ENST00000617930 CTRB2Q6GPI1 263 aa14.94□□□□□ -0.02
CNOT3-209ENST00000617930 FAM122CQ6P4D5 195 aa14.94□□□□□ -0.02
CNOT3-209ENST00000617930 BOLLQ8N9W6 283 aaKnown RBP14.94□□□□□ -0.02
CNOT3-209ENST00000617930 OPN3Q9H1Y3 402 aaPredicted RBP14.94□□□□□ -0.02
CNOT3-209ENST00000617930 UBE2NP61088 152 aaKnown RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 TGFBR3Q03167 851 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 TBC1D28Q2M2D7 210 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 FAM180AQ6UWF9 173 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 WDR86Q86TI4 376 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 TMEM200AQ86VY9 491 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 SNRNP40Q96DI7 357 aaKnown RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 PIK3IP1Q96FE7 263 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 PCDHB10Q9UN67 800 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 RP1L1Q8IWN7 2480 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 MBD3L4A6NDZ8 208 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 MBD3L3A6NE82 208 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 MBD3L5A6NJ08 208 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 ATP6V1G2-DDX39BF2Z307 99 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 RHBDL1O75783 438 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 OR7C1O76099 320 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 DUSP1P28562 367 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 HAGHLQ6PII5 290 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 UQCC3Q6UW78 93 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 CLEC18BQ6UXF7 455 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 FBXW12Q6X9E4 464 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 OR1S2Q8NGQ3 325 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 MBD3L2Q8NHZ7 208 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 STOML3Q8TAV4 291 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 ZCCHC14Q8WYQ9 949 aaKnown RBP14.93□□□□□ -0.02
CNOT3-209ENST00000617930 MARC2Q969Z3 335 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 BOD1Q96IK1 185 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 OPA3Q9H6K4 179 aa14.93□□□□□ -0.02
CNOT3-209ENST00000617930 A0A0B4J2A0 478 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 TEX13DA0A0J9YY54 714 aaPredicted RBP14.92□□□□□ -0.02
CNOT3-209ENST00000617930 TOR1AO14656 332 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 CNOT4O95628 575 aaKnown RBP14.92□□□□□ -0.02
CNOT3-209ENST00000617930 IGKV3-15P01624 115 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 FUT3P21217 361 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 DTYMKP23919 212 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 FGF12P61328 243 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 CXorf67Q86X51 503 aaPredicted RBP14.92□□□□□ -0.02
CNOT3-209ENST00000617930 SAXO1Q8IYX7 474 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 ZNF2Q9BSG1 426 aaPredicted RBP14.92□□□□□ -0.02
CNOT3-209ENST00000617930 RAB18Q9NP72 206 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 SHPKQ9UHJ6 478 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 TSPAN9O75954 239 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 PPP1CBP62140 327 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 ANKRD55Q3KP44 614 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 OR5L1Q8NGL2 311 aa14.92□□□□□ -0.02
CNOT3-209ENST00000617930 SLC25A40Q8TBP6 338 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms