RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PTBP1P26599 531 aaKnown RBP eCLIP2.92□□□□□ -1.947e-7■■■■■ 27.1
LPP-220ENST00000617246 CLDN18P56856 261 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 DAD1P61803 113 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 KHDC1Q4VXA5 237 aaKnown RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 CMBLQ96DG6 245 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 EMC6Q9BV81 110 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ZNF136P52737 540 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 C4orf48Q5BLP8 95 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 FZR1Q9UM11 496 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 EPOPA6NHQ4 379 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 GZMHP20718 246 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 DIRAS2Q96HU8 199 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 IER3IP1Q9Y5U9 82 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 APOMO95445 188 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 TFAP2AP05549 437 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 RANP62826 216 aaKnown RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 FAM198BQ6UWH4 519 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR10W1Q8NGF6 305 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR51S1Q8NGJ8 323 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 TNFRSF14Q92956 283 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 IL26Q9NPH9 171 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 AKAIN1P0CW23 69 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CCL8P80075 99 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ZNF85Q03923 595 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ZNF672Q499Z4 452 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 MIDNQ504T8 468 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 SAMD12Q8N8I0 201 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR1M1Q8NGA1 313 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 FEVQ99581 238 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 FOXC2Q99958 501 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 SLC17A5Q9NRA2 495 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 MBNL3Q9NUK0 354 aaKnown RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 FAM240BA0A1B0GVZ2 78 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 METTL15A6NJ78 407 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 OR13C7P0DN81 318 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 CR2P20023 1033 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 CDX1P47902 265 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 HERPUD1Q15011 391 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ZNF486Q96H40 463 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 SELENOIQ9C0D9 397 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 OOSP1A8MZH6 123 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ONECUT2O95948 504 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 S100A2P29034 98 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 POLR2IP36954 125 aaKnown RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 NEDD8Q15843 81 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 C14orf177Q52M58 125 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 OR4K5Q8NGD3 323 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 TMEM167AQ8TBQ9 72 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 FOXN4Q96NZ1 517 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 C19orf53Q9UNZ5 99 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 H3BUX3 64 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 PPP1R2P9O14990 202 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 GGCTO75223 188 aaKnown RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 HBZP02008 142 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 GABRB3P28472 473 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 PSG9Q00887 426 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 TMEM155Q4W5P6 130 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ZNF322Q6U7Q0 402 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 OR9G4Q8NGQ1 327 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 DTD1Q8TEA8 209 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 GSKIPQ9P0R6 139 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 DSPPQ9NZW4 1301 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 NUPR2A6NF83 97 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 RAB29O14966 203 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 TSPAN15O95858 294 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 CTSBP07858 339 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 CAMLGP49069 296 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 PMS2P11Q13670 270 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 MBOAT2Q6ZWT7 520 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ANGPTL5Q86XS5 388 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 WDFY1Q8IWB7 410 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 EIF4E3Q8N5X7 224 aaKnown RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 SUMF1Q8NBK3 374 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 GPX4P36969 197 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 LYZP61626 148 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 COL10A1Q03692 680 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 OR2G2Q8NGZ5 317 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 FCRL1Q96LA6 429 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 SPSB2Q99619 263 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 OR2D2Q9H210 308 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ARID1AO14497 2285 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 IGKV3-7A0A075B6H7 116 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 EEDO75530 441 aaKnown RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 RP2O75695 350 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ZDHHC11BP0C7U3 371 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 MPV17LQ2QL34 196 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 RNF212Q495C1 297 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 AMIGO2Q86SJ2 522 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 MARS2Q96GW9 593 aaKnown RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 ASIC5Q9NY37 505 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 CACNA1DQ01668 2161 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 LOC285095A0A1B0GVY8 99 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 NAP1L6A6NFF2 107 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 OVOL1O14753 267 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 FRS3O43559 492 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 EFEMP2O95967 443 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 IGHMP01871 453 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 PRR31Q5SQ13 230 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 OR7G2Q8NG99 324 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms