RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 A0A0B4J203 849 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 TRAV24A0A0B4J272 114 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 RNF223E7ERA6 249 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 RAB27BO00194 218 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 GZMKP49863 264 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 SNU13P55769 128 aaKnown RBP19.5■□□□□ 0.71
RAB40C-212ENST00000569575 SCN1BQ07699 218 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 PAN3Q58A45 887 aaKnown RBP19.5■□□□□ 0.71
RAB40C-212ENST00000569575 ATAD3CQ5T2N8 411 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 C17orf107Q6ZR85 190 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 GDPD3Q7L5L3 318 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 SUMF2Q8NBJ7 301 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 ZNRF1Q8ND25 227 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 TMEM185AQ8NFB2 350 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 OR5H6Q8NGV6 325 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 MCFD2Q8NI22 146 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 C15orf40Q8WUR7 153 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 DPCDQ9BVM2 203 aaPredicted RBP19.5■□□□□ 0.71
RAB40C-212ENST00000569575 SHARPINQ9H0F6 387 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 RIMS4Q9H426 269 aaPredicted RBP19.5■□□□□ 0.71
RAB40C-212ENST00000569575 PLEKHJ1Q9NW61 149 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 COMMD3Q9UBI1 195 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 CTSZQ9UBR2 303 aa19.5■□□□□ 0.71
RAB40C-212ENST00000569575 FOXI3A8MTJ6 420 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-212ENST00000569575 SERPINE3A8MV23 424 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 B4DSR2 109 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 SIRPB1O00241 398 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 LIPFP07098 398 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 CHATP28329 748 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 VEGFCP49767 419 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 MEF2CQ06413 473 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-212ENST00000569575 Q6ZTK2 550 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 FAM216BQ8N7L0 139 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 RAB3CQ96E17 227 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 NARFLQ9H6Q4 476 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 PEX16Q9Y5Y5 336 aa19.49■□□□□ 0.71
RAB40C-212ENST00000569575 A0A1W2PPH5 198 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 TMEM82A0PJX8 343 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 PSPNO60542 156 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 RBMXP38159 391 aaKnown RBP19.48■□□□□ 0.71
RAB40C-212ENST00000569575 CEBPDP49716 269 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-212ENST00000569575 EFNB2P52799 333 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 GRK1Q15835 563 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 SIGIRRQ6IA17 410 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 LINC00299Q6ZSB3 139 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 SLC25A38Q96DW6 304 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 NICN1Q9BSH3 213 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 DCUN1D5Q9BTE7 237 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 KCNK15Q9H427 330 aa19.48■□□□□ 0.71
RAB40C-212ENST00000569575 MYO9AB2RTY4 2548 aa19.47■□□□□ 0.71
RAB40C-212ENST00000569575 XRCC3O43542 346 aa19.47■□□□□ 0.71
RAB40C-212ENST00000569575 GSTP1P09211 210 aaKnown RBP19.47■□□□□ 0.71
RAB40C-212ENST00000569575 FOSL1P15407 271 aa19.47■□□□□ 0.71
RAB40C-212ENST00000569575 GATA3P23771 443 aa19.47■□□□□ 0.71
RAB40C-212ENST00000569575 TALDO1P37837 337 aa19.47■□□□□ 0.71
RAB40C-212ENST00000569575 OR3A1P47881 315 aa19.47■□□□□ 0.71
RAB40C-212ENST00000569575 SLC35E4Q6ICL7 350 aa19.47■□□□□ 0.71
RAB40C-212ENST00000569575 C8orf46Q8TAG6 207 aa19.47■□□□□ 0.71
RAB40C-212ENST00000569575 MALRD1Q5VYJ5 2156 aa19.47■□□□□ 0.71
RAB40C-212ENST00000569575 CREBBPQ92793 2442 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 A0A0A6YYD4 124 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 SOCS1O15524 211 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 NDUFB7P17568 137 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 S100A5P33763 92 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 TMEM50BP56557 158 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 PITPNAQ00169 270 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 BAIAP2L2Q6UXY1 529 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 CMTM4Q8IZR5 234 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 GAPTQ8N292 157 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 LINC01356Q8N9X3 169 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 OR4S1Q8NGB4 309 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 METRNQ9UJH8 293 aa19.46■□□□□ 0.71
RAB40C-212ENST00000569575 LOC105371242A0A075B767 164 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 RGS5O15539 181 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 CLPXO76031 633 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 HIST1H1DP16402 221 aaKnown RBP19.45■□□□□ 0.7
RAB40C-212ENST00000569575 PNLIPRP3Q17RR3 467 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 TMEM249Q2WGJ8 235 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 NEK7Q8TDX7 302 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 ST8SIA4Q92187 359 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 COX4I2Q96KJ9 171 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 DCTN5Q9BTE1 182 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 C6orf62Q9GZU0 229 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-212ENST00000569575 PPA2Q9H2U2 334 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 OR6C3Q9NZP0 311 aa19.45■□□□□ 0.7
RAB40C-212ENST00000569575 TRAV20A0A0B4J274 112 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 hADV38S2A0JD32 116 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 MNDAP41218 407 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 P2RX3P56373 397 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 PDCD1Q15116 288 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 ZNF554Q86TJ5 538 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 ZNF565Q8N9K5 539 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 WDFY2Q96P53 400 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 PECRQ9BY49 303 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 RAB9BQ9NP90 201 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 ETAA1Q9NY74 926 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 MGAT4AQ9UM21 535 aa19.44■□□□□ 0.7
RAB40C-212ENST00000569575 YLPM1P49750 1951 aaKnown RBP19.43■□□□□ 0.7
RAB40C-212ENST00000569575 TMEM30CPA0ZSE6 113 aa19.43■□□□□ 0.7
RAB40C-212ENST00000569575 KIAA1324LA8MWY0 1029 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms