RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CHST4Q8NCG5 386 aa9.53□□□□□ -0.88
KARS-207ENST00000566560 FAM234AQ9H0X4 552 aa9.53□□□□□ -0.88
KARS-207ENST00000566560 RBM38Q9H0Z9 239 aaKnown RBP9.53□□□□□ -0.88
KARS-207ENST00000566560 MAB21L2Q9Y586 359 aa9.53□□□□□ -0.88
KARS-207ENST00000566560 TMEM82A0PJX8 343 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A10PA6NDY2 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A18PA6NE21 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A16PA6NEW6 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A20PA6NIJ5 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A8PA6NJQ4 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A7PA6NKC0 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A22PA8MWA6 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 KIAA1324LA8MWY0 1029 aaPredicted RBP9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A12PA8MX19 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A5PA8MXJ8 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A23PA8MXZ1 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 B4DSR2 109 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 SLC33A1O00400 549 aaPredicted RBP9.52□□□□□ -0.89
KARS-207ENST00000566560 DEGS1O15121 323 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 LDLRAD4O15165 306 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 ZNF737O75373 536 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FCN3O75636 299 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 MSMBP08118 114 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 INHBBP09529 407 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A15PP0C7V4 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A13PP0C7W8 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A14PP0C7W9 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FAM90A24PP0C7X0 464 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 CD99P14209 185 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 LCN2P80188 198 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 PDCD1Q15116 288 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 C2orf76Q3KRA6 126 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 PAN3Q58A45 887 aaKnown RBP9.52□□□□□ -0.89
KARS-207ENST00000566560 Q6P435 159 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 METAP1DQ6UB28 335 aaPredicted RBP9.52□□□□□ -0.89
KARS-207ENST00000566560 ZNF841Q6ZN19 808 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 OR8H2Q8N162 312 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 LINC01356Q8N9X3 169 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 PPP1R35Q8TAP8 253 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 C1orf159Q96HA4 380 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 SNX22Q96L94 193 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 NICN1Q9BSH3 213 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 URM1Q9BTM9 101 aaKnown RBP9.52□□□□□ -0.89
KARS-207ENST00000566560 TM2D1Q9BX74 207 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 CHST6Q9GZX3 395 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 PPA2Q9H2U2 334 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 SEBOXQ9HB31 216 aaPredicted RBP9.52□□□□□ -0.89
KARS-207ENST00000566560 ZNF581Q9P0T4 197 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 FBLN5Q9UBX5 448 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 RSL24D1Q9UHA3 163 aaKnown RBP9.52□□□□□ -0.89
KARS-207ENST00000566560 ARHGAP32A7KAX9 2087 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 DSCAML1Q8TD84 2053 aa9.52□□□□□ -0.89
KARS-207ENST00000566560 TRAV24A0A0B4J272 114 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 TMEM238LA0A1B0GVL6 79 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 SMIM31A0A1B0GVY4 71 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 K7N7A8 449 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 PSPNO60542 156 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 TMEM127O75204 238 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 PAHP00439 452 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 TK1P04183 234 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 RAB6AP20340 208 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 ZFP36P26651 326 aaKnown RBP9.51□□□□□ -0.89
KARS-207ENST00000566560 OR3A1P47881 315 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 RORCP51449 518 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 SCAND1P57086 179 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 PLA2G7Q13093 441 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 EDDM3AQ14507 147 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 ATXN7L3Q14CW9 347 aaPredicted RBP9.51□□□□□ -0.89
KARS-207ENST00000566560 GRK1Q15835 563 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 NKAPLQ5M9Q1 402 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 ATAD3CQ5T2N8 411 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 C17orf107Q6ZR85 190 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 GDPD3Q7L5L3 318 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 GLCCI1Q86VQ1 547 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 OR4S1Q8NGB4 309 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 NEK7Q8TDX7 302 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 H1FXQ92522 213 aaKnown RBP9.51□□□□□ -0.89
KARS-207ENST00000566560 AP3S1Q92572 193 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 MSI2Q96DH6 328 aaKnown RBP9.51□□□□□ -0.89
KARS-207ENST00000566560 MRI1Q9BV20 369 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 DPCDQ9BVM2 203 aaPredicted RBP9.51□□□□□ -0.89
KARS-207ENST00000566560 BARHL1Q9BZE3 327 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 LPAR5Q9H1C0 372 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 IFT22Q9H7X7 185 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 SPACA1Q9HBV2 294 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 RCC2Q9P258 522 aaKnown RBP9.51□□□□□ -0.89
KARS-207ENST00000566560 ETV7Q9Y603 341 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 VPS13CQ709C8 3753 aa9.51□□□□□ -0.89
KARS-207ENST00000566560 A0A0A6YYD4 124 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 TRAV20A0A0B4J274 112 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 C22orf46C9J442 243 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 ZNF701M0R085 212 aaPredicted RBP9.5□□□□□ -0.89
KARS-207ENST00000566560 PDCD6O75340 191 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 FOSL1P15407 271 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 LMO1P25800 156 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 SOX6P35712 828 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 EFNB2P52799 333 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 EDDM3BP56851 147 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 FAM189A2Q15884 450 aa9.5□□□□□ -0.89
KARS-207ENST00000566560 CYB5R2Q6BCY4 276 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms