RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 SULT4A1Q9BR01 284 aa4.14□□□□□ -1.75
APP-217ENST00000548570 DCTN5Q9BTE1 182 aa4.14□□□□□ -1.75
APP-217ENST00000548570 MRI1Q9BV20 369 aa4.14□□□□□ -1.75
APP-217ENST00000548570 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
APP-217ENST00000548570 REG4Q9BYZ8 158 aa4.14□□□□□ -1.75
APP-217ENST00000548570 SELENOIQ9C0D9 397 aa4.14□□□□□ -1.75
APP-217ENST00000548570 ZNF665Q9H7R5 613 aa4.14□□□□□ -1.75
APP-217ENST00000548570 PATZ1Q9HBE1 687 aaKnown RBP4.14□□□□□ -1.75
APP-217ENST00000548570 PLGRKTQ9HBL7 147 aa4.14□□□□□ -1.75
APP-217ENST00000548570 NEK6Q9HC98 313 aa4.14□□□□□ -1.75
APP-217ENST00000548570 MMP26Q9NRE1 261 aa4.14□□□□□ -1.75
APP-217ENST00000548570 GHRLQ9UBU3 117 aa4.14□□□□□ -1.75
APP-217ENST00000548570 ITGB1BP2Q9UKP3 347 aa4.14□□□□□ -1.75
APP-217ENST00000548570 SPATA2Q9UM82 520 aa4.14□□□□□ -1.75
APP-217ENST00000548570 ST3GAL6Q9Y274 331 aa4.14□□□□□ -1.75
APP-217ENST00000548570 NAV2Q8IVL1 2488 aa4.14□□□□□ -1.75
APP-217ENST00000548570 TEX15Q9BXT5 2789 aa4.14□□□□□ -1.75
APP-217ENST00000548570 PKDREJQ9NTG1 2253 aa4.13□□□□□ -1.75
APP-217ENST00000548570 A0A075B6Q4 140 aa4.13□□□□□ -1.75
APP-217ENST00000548570 TRBV23-1A0A0A0MS06 115 aa4.13□□□□□ -1.75
APP-217ENST00000548570 TRAV39A0A0B4J263 110 aa4.13□□□□□ -1.75
APP-217ENST00000548570 TRAV38-1A0A0B4J264 116 aa4.13□□□□□ -1.75
APP-217ENST00000548570 TRAV20A0A0B4J274 112 aa4.13□□□□□ -1.75
APP-217ENST00000548570 MEX3AA1L020 520 aaKnown RBP4.13□□□□□ -1.75
APP-217ENST00000548570 LRRC30A6NM36 301 aa4.13□□□□□ -1.75
APP-217ENST00000548570 A8MXK9 166 aa4.13□□□□□ -1.75
APP-217ENST00000548570 H7C1Q1 480 aa4.13□□□□□ -1.75
APP-217ENST00000548570 K7N7A8 449 aa4.13□□□□□ -1.75
APP-217ENST00000548570 SIRPB1O00241 398 aa4.13□□□□□ -1.75
APP-217ENST00000548570 MFNGO00587 321 aa4.13□□□□□ -1.75
APP-217ENST00000548570 PHF1O43189 567 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 ADAM20O43506 726 aa4.13□□□□□ -1.75
APP-217ENST00000548570 SSX5O60225 188 aa4.13□□□□□ -1.75
APP-217ENST00000548570 HPGDSO60760 199 aa4.13□□□□□ -1.75
APP-217ENST00000548570 ZNF780AO75290 641 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 CRTAPO75718 401 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 HLA-DQB1P01920 261 aa4.13□□□□□ -1.75
APP-217ENST00000548570 TK1P04183 234 aa4.13□□□□□ -1.75
APP-217ENST00000548570 CSF3P09919 207 aa4.13□□□□□ -1.75
APP-217ENST00000548570 OCMP0CE72 109 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 UBBP0CG47 229 aa4.13□□□□□ -1.75
APP-217ENST00000548570 CGB3P0DN86 165 aa4.13□□□□□ -1.75
APP-217ENST00000548570 CGB7P0DN87 165 aa4.13□□□□□ -1.75
APP-217ENST00000548570 IGHV4-31P0DP07 118 aa4.13□□□□□ -1.75
APP-217ENST00000548570 SLC25A16P16260 332 aa4.13□□□□□ -1.75
APP-217ENST00000548570 ELK1P19419 428 aa4.13□□□□□ -1.75
APP-217ENST00000548570 RAB6AP20340 208 aa4.13□□□□□ -1.75
APP-217ENST00000548570 GABRR1P24046 479 aa4.13□□□□□ -1.75
APP-217ENST00000548570 RORCP51449 518 aa4.13□□□□□ -1.75
APP-217ENST00000548570 PSMD7P51665 324 aa4.13□□□□□ -1.75
APP-217ENST00000548570 BMXP51813 675 aa4.13□□□□□ -1.75
APP-217ENST00000548570 CAPZA1P52907 286 aa4.13□□□□□ -1.75
APP-217ENST00000548570 DLX6P56179 175 aa4.13□□□□□ -1.75
APP-217ENST00000548570 ERVFRD-1P60508 538 aa4.13□□□□□ -1.75
APP-217ENST00000548570 SUMO1P63165 101 aaKnown RBP4.13□□□□□ -1.75
APP-217ENST00000548570 IKZF1Q13422 519 aa4.13□□□□□ -1.75
APP-217ENST00000548570 RSU1Q15404 277 aa4.13□□□□□ -1.75
APP-217ENST00000548570 MICBQ29980 383 aa4.13□□□□□ -1.75
APP-217ENST00000548570 FBLN7Q53RD9 439 aa4.13□□□□□ -1.75
APP-217ENST00000548570 SPIN3Q5JUX0 258 aa4.13□□□□□ -1.75
APP-217ENST00000548570 RSBN1Q5VWQ0 802 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 SHEQ5VZ18 495 aa4.13□□□□□ -1.75
APP-217ENST00000548570 WDR25Q64LD2 544 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 FAM53AQ6NSI3 398 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 CLEC2AQ6UVW9 174 aa4.13□□□□□ -1.75
APP-217ENST00000548570 SPNS3Q6ZMD2 512 aa4.13□□□□□ -1.75
APP-217ENST00000548570 OR2W3Q7Z3T1 314 aa4.13□□□□□ -1.75
APP-217ENST00000548570 C6orf201Q7Z4U5 140 aa4.13□□□□□ -1.75
APP-217ENST00000548570 Q8IYB0 196 aa4.13□□□□□ -1.75
APP-217ENST00000548570 IZUMO1Q8IYV9 350 aa4.13□□□□□ -1.75
APP-217ENST00000548570 C1orf87Q8N0U7 546 aa4.13□□□□□ -1.75
APP-217ENST00000548570 GAPTQ8N292 157 aa4.13□□□□□ -1.75
APP-217ENST00000548570 SUMF2Q8NBJ7 301 aa4.13□□□□□ -1.75
APP-217ENST00000548570 LY6G5BQ8NDX9 201 aa4.13□□□□□ -1.75
APP-217ENST00000548570 KCNG3Q8TAE7 436 aa4.13□□□□□ -1.75
APP-217ENST00000548570 ST8SIA4Q92187 359 aa4.13□□□□□ -1.75
APP-217ENST00000548570 RAB1CQ92928 201 aa4.13□□□□□ -1.75
APP-217ENST00000548570 PTX4Q96A99 478 aa4.13□□□□□ -1.75
APP-217ENST00000548570 MRPS24Q96EL2 167 aaKnown RBP4.13□□□□□ -1.75
APP-217ENST00000548570 CPNE2Q96FN4 548 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 COX4I2Q96KJ9 171 aa4.13□□□□□ -1.75
APP-217ENST00000548570 SMR3AQ99954 134 aa4.13□□□□□ -1.75
APP-217ENST00000548570 NUDT16L1Q9BRJ7 211 aaKnown RBP4.13□□□□□ -1.75
APP-217ENST00000548570 HDHD3Q9BSH5 251 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 PIMREGQ9BSJ6 248 aa4.13□□□□□ -1.75
APP-217ENST00000548570 CHST6Q9GZX3 395 aa4.13□□□□□ -1.75
APP-217ENST00000548570 DNTTIP1Q9H147 329 aa4.13□□□□□ -1.75
APP-217ENST00000548570 ABCG5Q9H222 651 aa4.13□□□□□ -1.75
APP-217ENST00000548570 ZMAT3Q9HA38 289 aaKnown RBP4.13□□□□□ -1.75
APP-217ENST00000548570 RHOFQ9HBH0 211 aa4.13□□□□□ -1.75
APP-217ENST00000548570 C19orf12Q9NSK7 152 aa4.13□□□□□ -1.75
APP-217ENST00000548570 RHBDL2Q9NX52 303 aa4.13□□□□□ -1.75
APP-217ENST00000548570 CCDC59Q9P031 241 aaKnown RBP4.13□□□□□ -1.75
APP-217ENST00000548570 ABRACLQ9P1F3 81 aa4.13□□□□□ -1.75
APP-217ENST00000548570 OR14J1Q9UGF5 321 aa4.13□□□□□ -1.75
APP-217ENST00000548570 POLR3KQ9Y2Y1 108 aaPredicted RBP4.13□□□□□ -1.75
APP-217ENST00000548570 ROS1P08922 2347 aa4.13□□□□□ -1.75
APP-217ENST00000548570 ABCA4P78363 2273 aa4.12□□□□□ -1.75
APP-217ENST00000548570 IGKV1D-8A0A087WSZ0 117 aa4.12□□□□□ -1.75
APP-217ENST00000548570 ISPDA4D126 451 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms