RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 NDUFA2O43678 99 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF780AO75290 641 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 TFF1P04155 84 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 UBBP0CG47 229 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 DUX4L2P0CJ85 424 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 DUX4L3P0CJ86 424 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 DUX4L4P0CJ87 422 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 DUX4L5P0CJ88 424 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 DUX4L6P0CJ89 424 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 DUX4L7P0CJ90 424 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 PSG2P11465 335 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SELLP14151 372 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 RAB3BP20337 219 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SERPINA2P20848 420 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 HTR2CP28335 458 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SDC2P34741 201 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 RPL5P46777 297 aaKnown RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 PITPNBP48739 271 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 CEBPDP49716 269 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 RBM11P57052 281 aaKnown RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 FGF12P61328 243 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SEC61A1P61619 476 aaKnown RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 LMO4P61968 165 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 NCS1P62166 190 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 RAB11BQ15907 218 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 C21orf62-AS1Q17RA5 79 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 RNF151Q2KHN1 245 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM95Q3KNT9 176 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 ESCO2Q56NI9 601 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SPIN3Q5JUX0 258 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 C1orf100Q5SVJ3 147 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 DUX4L9Q6RFH8 374 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 GLIPR1L1Q6UWM5 242 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SLC36A1Q7Z2H8 476 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 C1QL2Q7Z5L3 287 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 NR2C2APQ86WQ0 139 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 OR5T2Q8NGG2 359 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 OR8B3Q8NGG8 313 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 OR10K1Q8NGX5 313 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 ANGPTL6Q8NI99 470 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 FAM46BQ96A09 425 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 FOXRED1Q96CU9 486 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 C18orf12Q96KH6 178 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 C1orf147Q96MC9 270 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 GAFA1Q96PS6 74 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 OR8B2Q96RD0 313 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 S100A13Q99584 98 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 CST11Q9H112 138 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 DNTTIP1Q9H147 329 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 METTL9Q9H1A3 318 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 KCNK15Q9H427 330 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 PATZ1Q9HBE1 687 aaKnown RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 HMG20AQ9NP66 347 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 KAAG1Q9UBP8 84 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 DUX4Q9UBX2 424 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 MIOXQ9UGB7 285 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 OR14J1Q9UGF5 321 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 V9GY05 133 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SETD2Q9BYW2 2564 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 ZFHX3Q15911 3703 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 A0A0G2JK05 382 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 A0A1W2PP11 408 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 IFITM5A6NNB3 132 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 FAM157AC9JC47 383 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 PHF1O43189 567 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-211ENST00000546304 NOL3O60936 208 aaKnown RBP5.25□□□□□ -1.57
PRKDC-211ENST00000546304 HAND1O96004 215 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 CSTBP04080 98 aaKnown RBP5.25□□□□□ -1.57
PRKDC-211ENST00000546304 MSMBP08118 114 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 IGHV4-31P0DP07 118 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 CALCBP10092 127 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 GTF2F2P13984 249 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 MGMTP16455 207 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 CPT2P23786 658 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 TGFBR1P36897 503 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 GABRA2P47869 451 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 GZMKP49863 264 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 PSMD7P51665 324 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 CLDN12P56749 244 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 LSM3P62310 102 aaKnown RBP5.25□□□□□ -1.57
PRKDC-211ENST00000546304 GNB2P62879 340 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 MXD1Q05195 221 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 KRTAP1-1Q07627 177 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 GPR176Q14439 515 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 IL13RA2Q14627 380 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF146Q15072 292 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 P2RY14Q15391 338 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 CTF1Q16619 201 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 PIGYQ3MUY2 71 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 NHLRC3Q5JS37 347 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 HES5Q5TA89 166 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 GPR107Q5VW38 600 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 ELP2Q6IA86 826 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 FAM166AQ6J272 317 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 SFXN4Q6P4A7 337 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 LYPD2Q6UXB3 125 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 ASCL4Q6XD76 172 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF788Q6ZQV5 615 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 LINC00596Q86U02 117 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 TPRA1Q86W33 373 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms