RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ST6GALNAC6Q969X2 333 aa5.06□□□□□ -1.6
CSMD1-215ENST00000537824 CEP192Q8TEP8 1941 aa5.06□□□□□ -1.6
CSMD1-215ENST00000537824 C7orf66A4D0T2 115 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 DNPH1O43598 174 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 MPLP40238 635 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 HHEXQ03014 270 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PLXDC1Q8IUK5 500 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 LRP12Q9Y561 859 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ZNF106Q9H2Y7 1883 aaKnown RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TMEM265A0A087WTH1 108 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TMPRSS11DO60235 418 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 MMP16P51512 607 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 STRCP1A6NGW2 1772 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PNLIPRP2P54317 469 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 LSM11P83369 360 aaKnown RBP eCLIP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ZNF345Q14585 488 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 FAM110CQ1W6H9 321 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 OR1N2Q8NGR9 330 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 UBALD1Q8TB05 177 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PELI1Q96FA3 418 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 IGHV3-64DA0A0J9YX35 117 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TLCD2A6NGC4 264 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 NKX6-3A6NJ46 265 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 HSPB2A8KAH6 182 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TSPAN13O95857 204 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 EDN1P05305 212 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 SMIM13P0DJ93 91 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 HIST1H1EP10412 219 aaKnown RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 FUT7Q11130 342 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 HSPB2Q16082 182 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 CALHM1Q8IU99 346 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 C10orf126Q8N4M7 172 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 GVQW1Q8N7I0 195 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ZNF418Q8TF45 676 aaPredicted RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 B9D1Q9UPM9 204 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PIEZO2Q9H5I5 2752 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PRSS37A4D1T9 235 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PRDX4Q13162 271 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 RIGQ13278 110 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 NUFIP2Q7Z417 695 aaKnown RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ARIH2OSQ8N7S6 290 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 OR13G1Q8NGZ3 307 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 NEU3Q9UQ49 428 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TIMP1P01033 207 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 GDF1P27539 372 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TM4SF1P30408 202 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 MFAP2P55001 183 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 LDLRAD2Q5SZI1 272 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ISG20Q96AZ6 181 aaKnown RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 GALR2O43603 387 aaPredicted RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 MT-CO3P00414 261 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 SBK3P0C264 359 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 BMI1P35226 326 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ADTRPQ96IZ2 230 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 LY75O60449 1722 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 FGF18O76093 207 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 AGERQ15109 404 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 CCL14Q16627 93 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 LHFPL2Q6ZUX7 228 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 CITED1Q99966 193 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 GPR62Q9BZJ7 368 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PDLIM7Q9NR12 457 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 NLRC5Q86WI3 1866 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 M0R135 149 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ZFAND5O76080 213 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 RABIFP47224 123 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 RELQ04864 619 aaPredicted RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TNFRSF9Q07011 255 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 LYSMD4Q5XG99 296 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 RGS7BPQ6MZT1 257 aaPredicted RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 SLC48A1Q6P1K1 146 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 NUDT11Q96G61 164 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ZNF799Q96GE5 643 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 NDUFAF3Q9BU61 184 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 P4HTMQ9NXG6 502 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 IGSF23A1L1A6 192 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TMEM202A6NGA9 273 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 CHST1O43916 411 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PITX3O75364 302 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 HNRNPA1P09651 372 aaKnown RBP eCLIP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 MYOGP15173 224 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 HNRNPA1L2Q32P51 320 aaKnown RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 WDR38Q5JTN6 314 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ABHD17BQ5VST6 288 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 SDF2Q99470 211 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PARLQ9H300 379 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 LYRM4Q9HD34 91 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ZNF346Q9UL40 294 aaKnown RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 LOC390937A0A1W2PQ73 354 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 HCRTR1O43613 425 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 LMX1BO60663 402 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 MRPL33O75394 65 aaKnown RBP5.05□□□□□ -1.6
CSMD1-215ENST00000537824 AREGP15514 252 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 P2RY1P47900 373 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 HERPUD1Q15011 391 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 PARM1Q6UWI2 310 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 GLRX5Q86SX6 157 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TMEM183AQ8IXX5 376 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 ZDHHC23Q8IYP9 409 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms