RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MLLT11Q13015 90 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-210ENST00000522843 SPHARQ15513 63 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 OR8B8Q15620 311 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 KCNJ8Q15842 424 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 RSPO1Q2MKA7 263 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-210ENST00000522843 CCDC92Q53HC0 331 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-210ENST00000522843 MESTQ5EB52 335 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF684Q5T5D7 378 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 TEX36Q5VZQ5 186 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF782Q6ZMW2 699 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-210ENST00000522843 LINC00299Q6ZSB3 139 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 HDDC2Q7Z4H3 204 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 TMEM219Q86XT9 240 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 OR6V1Q8N148 313 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 SYS1Q8N2H4 156 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 BBS1Q8NFJ9 593 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 OR2T4Q8NH00 348 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 C8orf46Q8TAG6 207 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 HAVCR2Q8TDQ0 301 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 ABHD5Q8WTS1 349 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 RAB2BQ8WUD1 216 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 SEH1LQ96EE3 360 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 NMNAT3Q96T66 252 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 CCL13Q99616 98 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 MGLLQ99685 303 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 MND1Q9BWT6 205 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 HCAR1Q9BXC0 346 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 YIPF3Q9GZM5 350 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 EDA2RQ9HAV5 297 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 ADGRL4Q9HBW9 690 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 CHCHD3Q9NX63 227 aaKnown RBP5.26□□□□□ -1.57
SDCBP-210ENST00000522843 CLEC2DQ9UHP7 191 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 B9D1Q9UPM9 204 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 TCF19Q9Y242 345 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 ADAM18Q9Y3Q7 739 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 TSSC4Q9Y5U2 329 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-210ENST00000522843 VPS13DQ5THJ4 4388 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 IGLV1-36A0A0B4J1U3 117 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 TEX13CA0A0J9YWL9 993 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 TCRBV4S1A1TA0A5B7 111 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 FAM183AA6NL82 134 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 XKRYO14609 159 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 OGG1O15527 345 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 SGCEO43556 437 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 SULT1C4O75897 302 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 GABARAPO95166 117 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 RENP00797 406 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 TFF1P04155 84 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 MYL12AP19105 171 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 MAP2K4P45985 399 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 ETV1P50549 477 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 WNT4P56705 351 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 PCBD1P61457 104 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 MRPL28Q13084 256 aaKnown RBP5.25□□□□□ -1.57
SDCBP-210ENST00000522843 KRR1Q13601 381 aaKnown RBP5.25□□□□□ -1.57
SDCBP-210ENST00000522843 NEDD8Q15843 81 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 CTF1Q16619 201 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 TIGD6Q17RP2 521 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 CCDC58Q4VC31 144 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 PLA1AQ53H76 456 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 PLAC9Q5JTB6 97 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 WDR38Q5JTN6 314 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 LDLRAD2Q5SZI1 272 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 LCN1P1Q5VSP4 162 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 CD200R1LQ6Q8B3 271 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 COLCA1Q6ZS62 124 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 SLC16A12Q6ZSM3 486 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 C18orf65Q6ZTR6 163 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 SLC16A9Q7RTY1 509 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 ERI1Q8IV48 349 aaKnown RBP5.25□□□□□ -1.57
SDCBP-210ENST00000522843 C11orf53Q8IXP5 236 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 TIGD4Q8IY51 512 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 RPS4Y2Q8TD47 263 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 ZNRF4Q8WWF5 429 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 RASD2Q96D21 266 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 LYZL4Q96KX0 146 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 RBP7Q96R05 134 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 COQ7Q99807 217 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 FUNDC2Q9BWH2 189 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 CCDC90BQ9GZT6 254 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 FAM234AQ9H0X4 552 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 C1orf123Q9NWV4 160 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 BABAM2Q9NXR7 383 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 RSL24D1Q9UHA3 163 aaKnown RBP5.25□□□□□ -1.57
SDCBP-210ENST00000522843 ENPP5Q9UJA9 477 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 COMMD3-BMI1R4GMX3 469 aa5.25□□□□□ -1.57
SDCBP-210ENST00000522843 HERC1Q15751 4861 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 C12orf71A8MTZ7 269 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 VGLL3A8MV65 326 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 RAB27BO00194 218 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 DCTN6O00399 190 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 CCRL2O00421 344 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 KHDRBS3O75525 346 aaKnown RBP5.24□□□□□ -1.57
SDCBP-210ENST00000522843 NR2C1P13056 603 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 NDUFB7P17568 137 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 ALOX5APP20292 161 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 CA6P23280 308 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 FGF9P31371 208 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-210ENST00000522843 VDAC2P45880 294 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-210ENST00000522843 TGM4P49221 684 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms