RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 MBD2Q9UBB5 411 aa3.85□□□□□ -1.79
PABPC1-212ENST00000519622 SPRR3Q9UBC9 169 aa3.85□□□□□ -1.79
PABPC1-212ENST00000519622 IL36RNQ9UBH0 155 aa3.85□□□□□ -1.79
PABPC1-212ENST00000519622 UPB1Q9UBR1 384 aa3.85□□□□□ -1.79
PABPC1-212ENST00000519622 PADI1Q9ULC6 663 aa3.85□□□□□ -1.79
PABPC1-212ENST00000519622 HSF4Q9ULV5 492 aa3.85□□□□□ -1.79
PABPC1-212ENST00000519622 NOP16Q9Y3C1 178 aaKnown RBP3.85□□□□□ -1.79
PABPC1-212ENST00000519622 ZNF318Q5VUA4 2279 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 PTPRBP23467 1997 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 A0A087WWL8 130 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 IGKV1-6A0A0C4DH72 117 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 GJE1A6NN92 205 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 FAM166BA8MTA8 275 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 ZNF724A8MTY0 619 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SERPINE3A8MV23 424 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 C21orf140B9A014 251 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 FAM157AC9JC47 383 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 I3L521 148 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 LGALS8O00214 317 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 MT-CO3P00414 261 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 CTSDP07339 412 aaPredicted RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 COX5BP10606 129 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 CD79AP11912 226 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SERPINA2P20848 420 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 GLRA1P23415 457 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 CPT2P23786 658 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 DTYMKP23919 212 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 GDF1P27539 372 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 BLVRBP30043 206 aaPredicted RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 PMELP40967 661 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 MAGEA5P43359 124 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 HTR5AP47898 357 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 NPBWR2P48146 333 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 LUMP51884 338 aaPredicted RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SNU13P55769 128 aaKnown RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 RBM11P57052 281 aaKnown RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 TAS2R31P59538 309 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 RPS16P62249 146 aaKnown RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SCRN3Q0VDG4 424 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 PDZK1IP1Q13113 114 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SRSF6Q13247 344 aaKnown RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 TMEM187Q14656 261 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 HERPUD1Q15011 391 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 PPA1Q15181 289 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SURF2Q15527 256 aaPredicted RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 TAF13Q15543 124 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 TGIF1Q15583 401 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SLC9A3R2Q15599 337 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 TMEM128Q5BJH2 165 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 PABPC1L2AQ5JQF8 200 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 DCAF10Q5QP82 559 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 CLVS2Q5SYC1 327 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 PRSS54Q6PEW0 395 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 PCSK4Q6UW60 755 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 Q6ZS49 121 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 ACOT7LQ6ZUV0 252 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 CCDC28AQ8IWP9 274 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 LRTM2Q8N967 370 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 ZFP62Q8NB50 900 aaPredicted RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SLC30A7Q8NEW0 376 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SEMA6DQ8NFY4 1073 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 OR51T1Q8NGJ9 327 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 OR4A4PQ8NGN8 299 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 OR5H2Q8NGV7 314 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 LRRC20Q8TCA0 184 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SPTSSAQ969W0 71 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 CPNE4Q96A23 557 aaPredicted RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 MRPL24Q96A35 216 aaKnown RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 PIK3IP1Q96FE7 263 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 THOC3Q96J01 351 aaKnown RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 POM121L2Q96KW2 1035 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 AQP10Q96PS8 301 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 MICU1Q9BPX6 476 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SLC5A7Q9GZV3 580 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 ARV1Q9H2C2 271 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 RAB18Q9NP72 206 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 ACKR4Q9NPB9 350 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 IFT46Q9NQC8 304 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 ZNF629Q9UEG4 869 aaPredicted RBP3.84□□□□□ -1.79
PABPC1-212ENST00000519622 NUP50Q9UKX7 468 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 AMDHD2Q9Y303 409 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 CSAG2Q9Y5P2 127 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 FREM2Q5SZK8 3169 aa3.84□□□□□ -1.79
PABPC1-212ENST00000519622 SHANK1Q9Y566 2161 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 A0A0D9SG52 128 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 ZNF816-ZNF321PA0A0X1KG74 233 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 CDRT15L2A8MXV6 281 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 DNASE2O00115 360 aaPredicted RBP3.83□□□□□ -1.8
PABPC1-212ENST00000519622 GEMIN2O14893 280 aaKnown RBP3.83□□□□□ -1.8
PABPC1-212ENST00000519622 PDCD6O75340 191 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 NAPSAO96009 420 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 ACTL6AO96019 429 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 CST4P01036 141 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 NGFP01138 241 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 IGHV3-9P01782 118 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 HLA-HP01893 362 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 APOC1P02654 83 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 CSTBP04080 98 aaKnown RBP3.83□□□□□ -1.8
PABPC1-212ENST00000519622 HKR1P10072 659 aa3.83□□□□□ -1.8
PABPC1-212ENST00000519622 ICAM2P13598 275 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 270.1 ms