RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 MPZL1O95297 269 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 ERCC1P07992 297 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 CCL2P13500 99 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 PGAM2P15259 253 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 LAP3P28838 519 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 RAB13P51153 203 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 TAS2R31P59538 309 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 NKX6-1P78426 367 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 BLOC1S1P78537 153 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 ENDOGQ14249 297 aaKnown RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 PNLIPRP3Q17RR3 467 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 MSMPQ1L6U9 139 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF260Q3ZCT1 412 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 TMEM244Q5VVB8 128 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 OR10K2Q6IF99 312 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 CORO6Q6QEF8 472 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 RHOUQ7L0Q8 258 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 KCTD9Q7L273 389 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 LDLRAD3Q86YD5 345 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 BAP18Q8IXM2 172 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 PAQR4Q8N4S7 273 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 CPEB3Q8NE35 698 aaKnown RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 SLC30A7Q8NEW0 376 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 CASTOR1Q8WTX7 329 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 NANOS1Q8WY41 292 aaKnown RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 FAM46BQ96A09 425 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 MYEF2Q9P2K5 600 aaKnown RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 COA3Q9Y2R0 106 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 ITPR3Q14573 2671 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 TEX13DA0A0J9YY54 714 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-219ENST00000491747 RAB27BO00194 218 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 FARS2O95363 451 aaKnown RBP8.03□□□□□ -1.12
BRCA1-219ENST00000491747 SERPINA5P05154 406 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 PAX1P15863 534 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF32P17041 273 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 APOBEC3AP31941 199 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-219ENST00000491747 THBS4P35443 961 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 CX3CR1P49238 355 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 AKR1C2P52895 323 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 AKR1C1Q04828 323 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 GUCA2BQ16661 112 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 FAM27BQ5VT28 67 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 VHLLQ6RSH7 139 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 LRRC75A-AS1Q8N1F1 130 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 MUC15Q8N387 334 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 CHST4Q8NCG5 386 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 OR4D6Q8NGJ1 314 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 DCUN1D4Q92564 292 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 NMES1Q9C002 83 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 BIN3Q9NQY0 253 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 TMEM100Q9NV29 134 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 OR52A1Q9UKL2 312 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 HIVEP1P15822 2718 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 ARFGEF3Q5TH69 2177 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 USF3Q68DE3 2245 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 TRBV6-7A0A0A0MS04 114 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 NR2C1P13056 603 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF823P16415 610 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 AKR1C4P17516 323 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 ADCYAP1P18509 176 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 HRH1P35367 487 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 RPL35P42766 123 aaKnown RBP8.03□□□□□ -1.12
BRCA1-219ENST00000491747 PSG4Q00888 419 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 ADIPOQQ15848 244 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 SWI5Q1ZZU3 235 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 MICBQ29980 383 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 C10orf91Q5T1B1 145 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 DHRS7BQ6IAN0 325 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-219ENST00000491747 FBXL14Q8N1E6 418 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 NUP37Q8NFH4 326 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 AKR7LQ8NHP1 331 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 MRGPRFQ96AM1 343 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 MMP26Q9NRE1 261 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 CBLN4Q9NTU7 201 aa8.03□□□□□ -1.12
BRCA1-219ENST00000491747 C13orf42A0A1B0GVH6 325 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 TMEM269A0A1B0GVZ9 245 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 DBX1A6NMT0 343 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 SRSF10O75494 262 aaKnown RBP8.02□□□□□ -1.13
BRCA1-219ENST00000491747 CST2P09228 141 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 HSD11B1P28845 292 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 CBX5P45973 191 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 GSK3AP49840 483 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 B2MP61769 119 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 NKAPLQ5M9Q1 402 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 AWAT2Q6E213 333 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 OR52W1Q6IF63 320 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 DNM1P34Q6PK57 102 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 DEGS2Q6QHC5 323 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 IL34Q6ZMJ4 242 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 LYPD6Q86Y78 171 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 TGIF2LYQ8IUE0 185 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 GVQW1Q8N7I0 195 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 OR1M1Q8NGA1 313 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 C12orf57Q99622 126 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 NUDT16L1Q9BRJ7 211 aaKnown RBP8.02□□□□□ -1.13
BRCA1-219ENST00000491747 SEC11CQ9BY50 192 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 WNT5BQ9H1J7 359 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 CNTD2Q9H8S5 307 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 G6PC2Q9NQR9 355 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms