RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CRISP1P54107 249 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 CFHR3Q02985 330 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 PDZK1IP1Q13113 114 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 ASPHD1Q5U4P2 390 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 SLC35E3Q7Z769 313 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 RNF152Q8N8N0 203 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 CANT1Q8WVQ1 401 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 BORCS8Q96FH0 119 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 CNN2Q99439 309 aaKnown RBP10.07□□□□□ -0.8
UBR4-213ENST00000483922 ARGLU1Q9NWB6 273 aaPredicted RBP10.07□□□□□ -0.8
UBR4-213ENST00000483922 ING3Q9NXR8 418 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 GSTK1Q9Y2Q3 226 aa10.07□□□□□ -0.8
UBR4-213ENST00000483922 SEC14L6B5MCN3 397 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 SLC33A1O00400 549 aaPredicted RBP10.06□□□□□ -0.8
UBR4-213ENST00000483922 FGF16O43320 207 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 IGKV1D-33P01593 117 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 IGKV1-33P01594 117 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 TMEM11P17152 192 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 NFYBP25208 207 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 MNDAP41218 407 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 KIR3DL2P43630 455 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 CDX1P47902 265 aaPredicted RBP10.06□□□□□ -0.8
UBR4-213ENST00000483922 RBP2P50120 134 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 DAPP51397 102 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 CDC42P60953 191 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 CBX1P83916 185 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 FHL3Q13643 280 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 KIAA0141Q14154 515 aaPredicted RBP10.06□□□□□ -0.8
UBR4-213ENST00000483922 EBI3Q14213 229 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 GK3PQ14409 553 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 CDK5R1Q15078 307 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 PTGES3Q15185 160 aaKnown RBP10.06□□□□□ -0.8
UBR4-213ENST00000483922 PNLIPRP3Q17RR3 467 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 SPIN3Q5JUX0 258 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 FAM53AQ6NSI3 398 aaPredicted RBP10.06□□□□□ -0.8
UBR4-213ENST00000483922 TEX38Q6PEX7 206 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 OVCH2Q7RTZ1 564 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 COMMD1Q8N668 190 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 Q8N6K4 173 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 DNAAF1Q8NEP3 725 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 OR5M8Q8NGP6 311 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 OR13A1Q8NGR1 328 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 OR9G1Q8NH87 305 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 RFT1Q96AA3 541 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 CREB3L1Q96BA8 519 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 TBX5Q99593 518 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 FAM107BQ9H098 131 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 COMMD4Q9H0A8 199 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 PLSCR3Q9NRY6 295 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 CLN6Q9NWW5 311 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 PSG11Q9UQ72 335 aa10.06□□□□□ -0.8
UBR4-213ENST00000483922 ZNF256Q9Y2P7 627 aaPredicted RBP10.06□□□□□ -0.8
UBR4-213ENST00000483922 KBTBD11-OT1A0A1B0GTJ5 212 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 A0A1W2PPE3 182 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 B2RBV5 119 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 SH2D1BO14796 132 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 CSN2P05814 226 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 LYL1P12980 280 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 PTGFRP43088 359 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 GPR12P47775 334 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 POU3F4P49335 361 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 ARHGDIBP52566 201 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 ATP1B3P54709 279 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 GP2P55259 537 aaKnown RBP10.05□□□□□ -0.8
UBR4-213ENST00000483922 SCN1BQ07699 218 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 HES1Q14469 280 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 ZNF260Q3ZCT1 412 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 KLHL22Q53GT1 634 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 KRBOX4Q5JUW0 171 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 ZFAND6Q6FIF0 208 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 CCDC144NLQ6NUI1 221 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 Q8IYB0 196 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 YIPF7Q8N8F6 280 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 Q8N9W7 124 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 OR4D6Q8NGJ1 314 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 TOMM40LQ969M1 308 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 RPEQ96AT9 228 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 EAF1Q96JC9 268 aaPredicted RBP10.05□□□□□ -0.8
UBR4-213ENST00000483922 SPACA5Q96QH8 159 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 LINC00574Q9H8X3 128 aa10.05□□□□□ -0.8
UBR4-213ENST00000483922 EXOSC4Q9NPD3 245 aaKnown RBP10.05□□□□□ -0.8
UBR4-213ENST00000483922 IGHV3-72A0A0B4J1Y9 119 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 A0A1W2PQL4 384 aaPredicted RBP10.04□□□□□ -0.8
UBR4-213ENST00000483922 ZNF729A6NN14 1252 aaPredicted RBP10.04□□□□□ -0.8
UBR4-213ENST00000483922 NPIPB11E5RHQ5 1161 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 CCRL2O00421 344 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 GATBO75879 557 aaKnown RBP10.04□□□□□ -0.8
UBR4-213ENST00000483922 KDM4BO94953 1096 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 ATF1P18846 271 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 MTCP1P56278 107 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 SLC35B1P78383 322 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 ATXN7L3Q14CW9 347 aaPredicted RBP10.04□□□□□ -0.8
UBR4-213ENST00000483922 OR8U1Q8NH10 309 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 FGGYQ96C11 551 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 MNTQ99583 582 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 OSBPL10Q9BXB5 764 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 ABCG5Q9H222 651 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 ZNF556Q9HAH1 456 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 PLEKHA1Q9HB21 404 aa10.04□□□□□ -0.8
UBR4-213ENST00000483922 SMAD5-AS1Q9Y6J3 95 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms