RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 RPUSD1Q9UJJ7 312 aaKnown RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 INSIG2Q9Y5U4 225 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 BIRC6Q9NR09 4857 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 LOC105371242A0A075B767 164 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 TRAV20A0A0B4J274 112 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 IGHV2-70DA0A0C4DH43 119 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 TMEM272A0A1B0GTI8 110 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 MEX3AA1L020 520 aaKnown RBP5.75□□□□□ -1.49
LIMD1-204ENST00000474665 NOTOA8MTQ0 251 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 AIPO00170 330 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 SIRPB1O00241 398 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 NDUFB3O43676 98 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 FOXH1O75593 365 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 PAHP00439 452 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 CHRM2P08172 466 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 GTF2F2P13984 249 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 MMP9P14780 707 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 RAB3BP20337 219 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 MYL9P24844 172 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 NPY4RP50391 375 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 BMXP51813 675 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 DLX1P56177 255 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 DLX6P56179 175 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 GNB2P62879 340 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 RPS27AP62979 156 aaKnown RBP5.75□□□□□ -1.49
LIMD1-204ENST00000474665 MXD1Q05195 221 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 RAB11BQ15907 218 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 SFXN4Q6P4A7 337 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 BRICD5Q6PL45 260 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 Q6ZPA2 131 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 IL17RELQ6ZVW7 336 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 GPR141Q7Z602 305 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 TPRA1Q86W33 373 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 OSR2Q8N2R0 312 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 BPIFB2Q8N4F0 458 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 FAM89BQ8N5H3 189 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 TPRX1Q8N7U7 411 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 C3orf56Q8N813 242 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 PNLDC1Q8NA58 520 aaKnown RBP5.75□□□□□ -1.49
LIMD1-204ENST00000474665 TMEM185AQ8NFB2 350 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 C8orf46Q8TAG6 207 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 NDNFQ8TB73 568 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 PLPPR1Q8TBJ4 325 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 RAB40AQ8WXH6 277 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 ST8SIA4Q92187 359 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 SNX22Q96L94 193 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 TMPRSS13Q9BYE2 586 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 BARHL1Q9BZE3 327 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 SELENOIQ9C0D9 397 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 CHST6Q9GZX3 395 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 FAM234AQ9H0X4 552 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 RBM38Q9H0Z9 239 aaKnown RBP5.75□□□□□ -1.49
LIMD1-204ENST00000474665 SLITRK2Q9H156 845 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 LPAR5Q9H1C0 372 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 RCC2Q9P258 522 aaKnown RBP5.75□□□□□ -1.49
LIMD1-204ENST00000474665 OR5V1Q9UGF6 321 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 STEAP1Q9UHE8 339 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 ST3GAL6Q9Y274 331 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 CEPT1Q9Y6K0 416 aa5.75□□□□□ -1.49
LIMD1-204ENST00000474665 NKX6-3A6NJ46 265 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 PDCD5O14737 125 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 SH2D1BO14796 132 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 DEGS1O15121 323 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 ZNF780AO75290 641 aaPredicted RBP5.74□□□□□ -1.49
LIMD1-204ENST00000474665 CRTAPO75718 401 aaPredicted RBP5.74□□□□□ -1.49
LIMD1-204ENST00000474665 OR7C1O76099 320 aaPredicted RBP5.74□□□□□ -1.49
LIMD1-204ENST00000474665 MPIG6BO95866 241 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 FSHBP01225 129 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 UBBP0CG47 229 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 CGB3P0DN86 165 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 CGB7P0DN87 165 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 SNRPBP14678 240 aaKnown RBP5.74□□□□□ -1.49
LIMD1-204ENST00000474665 ARSBP15848 533 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 NDUFB7P17568 137 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 SRD5A1P18405 259 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 GABRR1P24046 479 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 CHATP28329 748 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 GLIPR1P48060 266 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 PSMD7P51665 324 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 CAPZA1P52907 286 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 TMEM50BP56557 158 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 ERVFRD-1P60508 538 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 PRB3Q04118 309 aaPredicted RBP5.74□□□□□ -1.49
LIMD1-204ENST00000474665 SCN1BQ07699 218 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 ZNF273Q14593 569 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 SPCS2Q15005 226 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 CR1LQ2VPA4 569 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 MOGAT2Q3SYC2 334 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 TIMM50Q3ZCQ8 353 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 LRRC10Q5BKY1 277 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 PLAC9Q5JTB6 97 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 PRR31Q5SQ13 230 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 UTF1Q5T230 341 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 TMEM200BQ69YZ2 307 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 OR2W3Q7Z3T1 314 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 GLCCI1Q86VQ1 547 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 OR8H2Q8N162 312 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 Q8N7P7 452 aa5.74□□□□□ -1.49
LIMD1-204ENST00000474665 ASCC1Q8N9N2 400 aaKnown RBP5.74□□□□□ -1.49
LIMD1-204ENST00000474665 SUMF2Q8NBJ7 301 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms