RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 LDLRAD3Q86YD5 345 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 ZSCAN4Q8NAM6 433 aaPredicted RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 OR10G2Q8NGC3 310 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 OR8D4Q8NGM9 314 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 Q8TCH9 128 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 APH1BQ8WW43 257 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 NARS2Q96I59 477 aaKnown RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 CMTM3Q96MX0 182 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 RBM14Q96PK6 669 aaKnown RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 TBX15Q96SF7 602 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 ADAT1Q9BUB4 502 aaKnown RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 PPP1R3EQ9H7J1 279 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 HEXA-AS1Q9H8Q6 139 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 ARHGAP32A7KAX9 2087 aa5.71□□□□□ -1.49
CKS1B-205ENST00000473344 TRAV6A0A075B6T7 132 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 A0A087WUU8 490 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 A0A0B4J293 547 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 ZNF816-ZNF321PA0A0X1KG74 233 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 TRDV1A0A1B0GX56 115 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 OOEPA6NGQ2 149 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 A6NLC8 198 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 G3V4G9 280 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 J3KTA2 159 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 LGALS8O00214 317 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 CDC42EP2O14613 210 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 NDUFB2O95178 105 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 SERPINA3P01011 423 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 HLA-DQA2P01906 255 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 GYPAP02724 150 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 SEMG1P04279 462 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 GRPP07492 148 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 RAB3BP20337 219 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 CA6P23280 308 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 PAX6P26367 422 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 CRABP1P29762 137 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 S100A11P31949 105 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 ARHGDIBP52566 201 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 TSPAN5P62079 268 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 EGR3Q06889 387 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 ECH1Q13011 328 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 FHL1Q13642 323 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 MPPED2Q15777 294 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 FAM189A2Q15884 450 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 GUCA2BQ16661 112 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 PLA1AQ53H76 456 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 DNLZQ5SXM8 178 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 CNIH2Q6PI25 160 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 Q6ZSV7 163 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 Q6ZTK2 550 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 UTS2BQ765I0 119 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 FAM122BQ7Z309 247 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 REC114Q7Z4M0 266 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 VMO1Q7Z5L0 202 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 CMTM4Q8IZR5 234 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 OR6V1Q8N148 313 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 FTMTQ8N4E7 242 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 NANOGP1Q8N7R0 232 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 OR8J1Q8NGP2 316 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 OR2AJ1Q8NGZ0 328 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 NPRL2Q8WTW4 380 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 TCTEX1D2Q8WW35 142 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 ORAI1Q96D31 301 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 PHYHIPLQ96FC7 376 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 FAM46AQ96IP4 442 aaKnown RBP5.71□□□□□ -1.5
CKS1B-205ENST00000473344 LINC00052Q96N35 136 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 ATF6BQ99941 703 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 GHITMQ9H3K2 345 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 C16orf95Q9H693 158 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 CNTD2Q9H8S5 307 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 TMEM138Q9NPI0 162 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 KRCC1Q9NPI7 259 aaPredicted RBP5.71□□□□□ -1.5
CKS1B-205ENST00000473344 TXNL4BQ9NX01 149 aaKnown RBP5.71□□□□□ -1.5
CKS1B-205ENST00000473344 VSX1Q9NZR4 365 aaPredicted RBP5.71□□□□□ -1.5
CKS1B-205ENST00000473344 ONECUT1Q9UBC0 465 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 CTSZQ9UBR2 303 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 VPREB3Q9UKI3 123 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 RYR3Q15413 4870 aa5.71□□□□□ -1.5
CKS1B-205ENST00000473344 NOTCH1P46531 2555 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.7□□□□□ -1.5
CKS1B-205ENST00000473344 A0A1B0GWJ7 208 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 UBE2QL1A1L167 161 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 GGT3PA6NGU5 568 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 DBX1A6NMT0 343 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 ZNF729A6NN14 1252 aaPredicted RBP5.7□□□□□ -1.5
CKS1B-205ENST00000473344 SNRPGP15A8MWD9 76 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 DNASE2O00115 360 aaPredicted RBP5.7□□□□□ -1.5
CKS1B-205ENST00000473344 DVL1O14640 695 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 OR10H3O60404 316 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 SELENOFO60613 162 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 IFNA10P01566 189 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 APOC3P02656 99 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 CLEC2LP0C7M8 214 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 FOLR2P14207 255 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 GABRB1P18505 474 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 NFYAP23511 347 aaPredicted RBP5.7□□□□□ -1.5
CKS1B-205ENST00000473344 TGFBR1P36897 503 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 WNT4P56705 351 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 MRPS10P82664 201 aaKnown RBP5.7□□□□□ -1.5
CKS1B-205ENST00000473344 HOXA4Q00056 320 aaPredicted RBP5.7□□□□□ -1.5
CKS1B-205ENST00000473344 MZT1Q08AG7 82 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms