RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ZNF684Q5T5D7 378 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 OR10D3Q8NH80 312 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 C15orf40Q8WUR7 153 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 KCNE4Q8WWG9 221 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 ST6GALNAC2Q9UJ37 374 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 KLF13Q9Y2Y9 288 aaPredicted RBP16.51■□□□□ 0.23
CCDC50-202ENST00000392456 LIPGQ9Y5X9 500 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 RTTNQ86VV8 2226 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 DHRS7CA6NNS2 312 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 ZZEF1O43149 2961 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 PNPP00491 289 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 PGA4P0DJD7 388 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 RAB6AP20340 208 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 CLDN17P56750 224 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 RAC3P60763 192 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 SLC17A1Q14916 467 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 ZFP62Q8NB50 900 aaPredicted RBP16.51■□□□□ 0.23
CCDC50-202ENST00000392456 SYNPRQ8TBG9 265 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 CD300LFQ8TDQ1 290 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 DCUN1D4Q92564 292 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 RCC1LQ96I51 464 aaKnown RBP16.51■□□□□ 0.23
CCDC50-202ENST00000392456 ADAD1Q96M93 576 aaKnown RBP16.51■□□□□ 0.23
CCDC50-202ENST00000392456 LOC100509620A0A075B734 347 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 KLRC4-KLRK1H3BQV0 150 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 WNT11O96014 354 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 CSF1P09603 554 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 ALOX5APP20292 161 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 CSNK2A1P68400 391 aaPredicted RBP16.5■□□□□ 0.23
CCDC50-202ENST00000392456 ZNF585AQ6P3V2 769 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 ZIC4Q8N9L1 334 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 RAB40AQ8WXH6 277 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 CORO2AQ92828 525 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 HAVCR1Q96D42 359 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 SLC25A44Q96H78 314 aaPredicted RBP16.5■□□□□ 0.23
CCDC50-202ENST00000392456 LOC102725191A0A1B0GVB3 256 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 RPP14O95059 124 aaKnown RBP16.5■□□□□ 0.23
CCDC50-202ENST00000392456 LHX2P50458 406 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 CLDN12P56749 244 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 ERVFRD-1P60508 538 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 DHRS2Q13268 280 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 GUK1Q16774 197 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 NUFIP2Q7Z417 695 aaKnown RBP16.5■□□□□ 0.23
CCDC50-202ENST00000392456 DEFB127Q9H1M4 99 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 TAS2R8Q9NYW2 309 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 B4GALT7Q9UBV7 327 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 MRM2Q9UI43 246 aaKnown RBP16.5■□□□□ 0.23
CCDC50-202ENST00000392456 OR52A1Q9UKL2 312 aa16.5■□□□□ 0.23
CCDC50-202ENST00000392456 NOP16Q9Y3C1 178 aaKnown RBP16.5■□□□□ 0.23
CCDC50-202ENST00000392456 TNRC6AQ8NDV7 1962 aaKnown RBP16.49■□□□□ 0.23
CCDC50-202ENST00000392456 TGIF2-C20orf24A0A0A6YYL0 155 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 ZNF727A8MUV8 499 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 CYB5BO43169 146 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 AKAIN1P0CW23 69 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 SNCAP37840 140 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 ACTBP60709 375 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 ACTA2P62736 377 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 ACTG1P63261 375 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 ACTG2P63267 376 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 AWAT2Q6E213 333 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 ZNF705AQ6ZN79 300 aaPredicted RBP16.49■□□□□ 0.23
CCDC50-202ENST00000392456 Q6ZRG5 221 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 OR9K2Q8NGE7 335 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 OR2V1Q8NHB1 315 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 UPB1Q9UBR1 384 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 NCOR2Q9Y618 2525 aa16.49■□□□□ 0.23
CCDC50-202ENST00000392456 A0A1B0GTH9 108 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 GJE1A6NN92 205 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 MMP7P09237 267 aaPredicted RBP16.48■□□□□ 0.23
CCDC50-202ENST00000392456 CDAP32320 146 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 C3AR1Q16581 482 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 PHYHD1Q5SRE7 291 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 SLC26A10Q8NG04 563 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 ALKBH7Q9BT30 221 aaPredicted RBP16.48■□□□□ 0.23
CCDC50-202ENST00000392456 RNF24Q9Y225 148 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 CLDN18P56856 261 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 NANOS3P60323 173 aaKnown RBP16.48■□□□□ 0.23
CCDC50-202ENST00000392456 RPS11P62280 158 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCDC50-202ENST00000392456 ADAM8P78325 824 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 IGFL2Q6UWQ7 119 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 LYG1Q8N1E2 194 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 ZSCAN4Q8NAM6 433 aaPredicted RBP16.48■□□□□ 0.23
CCDC50-202ENST00000392456 OR1L6Q8NGR2 347 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 OTOSQ8NHW6 89 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 SMIM19Q96E16 107 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 SNX22Q96L94 193 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 GFI1Q99684 422 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 OR2J1Q9GZK6 312 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 PLSCR2Q9NRY7 297 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 KIAA1549Q9HCM3 1950 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 CHD8Q9HCK8 2581 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 SVILO95425 2214 aa16.48■□□□□ 0.23
CCDC50-202ENST00000392456 ZNHIT1O43257 154 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 IGHG1P01857 330 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 RAB7AP51149 207 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 CLRN1P58418 232 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 TAS2R19P59542 299 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 LINC00346Q8IVM7 164 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 SYS1Q8N2H4 156 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 COMMD1Q8N668 190 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 NOXO1Q8NFA2 376 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms