RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CA13Q8N1Q1 262 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 C5orf30Q96GV9 206 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 HSD17B6O14756 317 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 SHC1P29353 583 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 LSM11P83369 360 aaKnown RBP eCLIP8.71□□□□□ -1.02
COL12A1-201ENST00000322507 DEGS2Q6QHC5 323 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 SPACA9Q96E40 222 aaPredicted RBP8.71□□□□□ -1.02
COL12A1-201ENST00000322507 CBLN4Q9NTU7 201 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 PRSS37A4D1T9 235 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 M0R135 149 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 SSBP2P81877 361 aaPredicted RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 RNPS1Q15287 305 aaKnown RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 SMN1Q16637 294 aaKnown RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF799Q96GE5 643 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 WDFY2Q96P53 400 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 HSPB9Q9BQS6 159 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF407Q9C0G0 2248 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 ARID2Q68CP9 1835 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 BTG2P78543 158 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 THOC3Q96J01 351 aaKnown RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 EVX1P49640 407 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 OR2T6Q8NHC8 308 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 MRPS24Q96EL2 167 aaKnown RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 J3KTA2 159 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 P2RY10O00398 339 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 TRMT12Q53H54 448 aaKnown RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 ARRDC3Q96B67 414 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 SHISA4Q96DD7 197 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 RAB40CQ96S21 281 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 SDF2Q99470 211 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 FGF20Q9NP95 211 aaPredicted RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 PSMB11A5LHX3 300 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 HMGN4O00479 90 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 CAPZBP47756 277 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 LDLRAD2Q5SZI1 272 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 FNDC7Q5VTL7 733 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 SPXQ9BT56 116 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 WDFY1Q8IWB7 410 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 BAHD1Q8TBE0 780 aaPredicted RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 APOBEC3DQ96AK3 386 aaPredicted RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 DYSFO75923 2080 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 NUFIP2Q7Z417 695 aaKnown RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 MS4A6EQ96DS6 147 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 JAG1P78504 1218 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 FAHP16930 419 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 HOXC5Q00444 222 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 C10orf35Q96D05 121 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 GNB4Q9HAV0 340 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 HCFC1R1Q9NWW0 138 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 SLC25A1P53007 311 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 EDDM3BP56851 147 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 DGAT2L7PQ6IED9 249 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 C6orf15Q6UXA7 325 aaPredicted RBP8.7□□□□□ -1.02
COL12A1-201ENST00000322507 POM121L2Q96KW2 1035 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 PSENENQ9NZ42 101 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 OR51B2Q9Y5P1 312 aa8.7□□□□□ -1.02
COL12A1-201ENST00000322507 MEIKINA0A087WXM9 373 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 KIR2DL1P43626 348 aaPredicted RBP8.69□□□□□ -1.02
COL12A1-201ENST00000322507 KIR2DL2P43627 348 aaPredicted RBP8.69□□□□□ -1.02
COL12A1-201ENST00000322507 TMEM95Q3KNT9 176 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 ALG14Q96F25 216 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 CACNG5Q9UF02 275 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 PARP14Q460N5 1801 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 IL2RAP01589 272 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 PHLDA2Q53GA4 152 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 FAHD1Q6P587 224 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 ZDHHC23Q8IYP9 409 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 PNPLA1Q8N8W4 532 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 MYADML2A6NDP7 307 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 LILRA5A6NI73 299 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 H7C2G1 150 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF735P0CB33 412 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 PSMB5P28074 263 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.69□□□□□ -1.02
COL12A1-201ENST00000322507 CBLN2Q8IUK8 224 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 RALGAPA2Q2PPJ7 1873 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 DUSP18Q8NEJ0 188 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 TECRQ9NZ01 308 aaKnown RBP8.69□□□□□ -1.02
COL12A1-201ENST00000322507 THYN1Q9P016 225 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 TMEM189A5PLL7 270 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 PGGT1BP53609 377 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF345Q14585 488 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 MED20Q9H944 212 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 PRRT4C9JH25 899 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 RPL11P62913 178 aaKnown RBP8.69□□□□□ -1.02
COL12A1-201ENST00000322507 TMEM108Q6UXF1 575 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF740Q8NDX6 193 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 MEGF9Q9H1U4 602 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 YAE1D1Q9NRH1 226 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF107Q9UII5 783 aaPredicted RBP8.69□□□□□ -1.02
COL12A1-201ENST00000322507 SH2D7A6NKC9 451 aaPredicted RBP8.69□□□□□ -1.02
COL12A1-201ENST00000322507 MOSPD3O75425 235 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 ISG15P05161 165 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 SLC16A11Q8NCK7 471 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 TMEM167BQ9NRX6 74 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 FAM181BA6NEQ2 426 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 HRO43593 1189 aa8.69□□□□□ -1.02
COL12A1-201ENST00000322507 MOB3AQ96BX8 217 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms