RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ZNF736B4DX44 427 aaPredicted RBP16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 M0QZK8 103 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 GGCTO75223 188 aaKnown RBP16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 DUS4LO95620 317 aaKnown RBP16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 ADRA2CP18825 462 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 TDGF1P3P51864 188 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 MCEMP1Q8IX19 187 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 LRRC18Q8N456 261 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 OR13C8Q8NGS7 320 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 TRIB1Q96RU8 372 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 SNHG12Q9BXW3 62 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 WDR76Q9H967 626 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 MRPL22Q9NWU5 206 aaKnown RBP16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 C13orf42A0A1B0GVH6 325 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 TGOLN2O43493 480 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 RPS2P15880 293 aaKnown RBP16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 RAB6AP20340 208 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 PDZD11Q5EBL8 140 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLC25A47Q6Q0C1 308 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 KCTD9Q7L273 389 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLC16A9Q7RTY1 509 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 C5orf24Q7Z6I8 188 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 C20orf196Q8IYI0 205 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 INTS14Q96SY0 518 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 EIF5A2Q9GZV4 153 aaKnown RBP16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 CALHM2Q9HA72 323 aa16.4■□□□□ 0.22
COL4A3BP-201ENST00000261415 M0QYG6 137 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 CST4P01036 141 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 CFPP27918 469 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 PSMB10P40306 273 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 GFI1BQ5VTD9 330 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 OTPQ5XKR4 325 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 OR2T2Q6IF00 324 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 P4HA3Q7Z4N8 544 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 SLC26A10Q8NG04 563 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 OR6N2Q8NGY6 317 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 SNRNP40Q96DI7 357 aaKnown RBP16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 PBDC1Q9BVG4 233 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 VSIG4Q9Y279 399 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 SPTA1P02549 2419 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 A0A087WWC5 75 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 TMEM235A6NFC5 223 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 AHRRA9YTQ3 701 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 ZFPL1O95159 310 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 MPZL1O95297 269 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 PET100P0DJ07 73 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 GABRR1P24046 479 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 SERPINF1P36955 418 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 ZNF133P52736 654 aaPredicted RBP16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 KLRB1Q12918 225 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 PRR30Q53SZ7 412 aaPredicted RBP16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 SEH1LQ96EE3 360 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 CST11Q9H112 138 aa16.39■□□□□ 0.21
COL4A3BP-201ENST00000261415 MRPL33O75394 65 aaKnown RBP16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 CHATP28329 748 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 RPS27P42677 84 aaKnown RBP16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 MRPS11P82912 194 aaKnown RBP16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 MEP1BQ16820 701 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 ACSF3Q4G176 576 aaPredicted RBP16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 C10orf128Q5T292 105 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 MRPL52Q86TS9 123 aaKnown RBP16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 HIST1H2BLQ99880 126 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 ULBP2Q9BZM5 246 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 SMDT1Q9H4I9 107 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 MMP24Q9Y5R2 645 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 UPK3AO75631 287 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 GZMBP10144 247 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 ADAM8P78325 824 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 ODF4Q2M2E3 257 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 DPY19L4Q7Z388 723 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 CDC20BQ86Y33 519 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 SVIPQ8NHG7 77 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 GP6Q9HCN6 339 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 AMDHD2Q9Y303 409 aa16.38■□□□□ 0.21
COL4A3BP-201ENST00000261415 MSGN1A6NI15 193 aa16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 H0YIZ8 118 aa16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 CSTBP04080 98 aaKnown RBP16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 ZNF283Q8N7M2 679 aa16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 ALKBH3Q96Q83 286 aaPredicted RBP16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 SCRT1Q9BWW7 348 aa16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 SLC25A31Q9H0C2 315 aa16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 FAM212BQ9NTI7 297 aaPredicted RBP16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 RP1L1Q8IWN7 2480 aaPredicted RBP16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 SHANK1Q9Y566 2161 aa16.37■□□□□ 0.21
COL4A3BP-201ENST00000261415 JTBO76095 146 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 GCGP01275 180 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 FAM3AP98173 230 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 GMPPAQ96IJ6 420 aaPredicted RBP16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 PITPNC1Q9UKF7 332 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 KLHDC2Q9Y2U9 406 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 DHHO43323 396 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 CDAP32320 146 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 EFNB2P52799 333 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 ELOBQ15370 118 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 TMEM268Q5VZI3 342 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 RPL7L1Q6DKI1 246 aaKnown RBP16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 OR51D1Q8NGF3 324 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 CASTOR1Q8WTX7 329 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 SLC6A7Q99884 636 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms