RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Gm20824A0A087WS97 222 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Gm20911A0A087WSS0 222 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Gm29866A0A0A6YX04 222 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Gm17655A0A1B0GT13 591 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Prrt2E9PUL5 346 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Lrp3E9Q1T6 790 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Zfp160E9Q459 650 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Ntsr1O88319 424 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 VtnP29788 478 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Fgf14P70379 247 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Polr1dP97304 133 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Gm10644Q3TZG3 87 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Glra1Q64018 457 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Heatr6Q6P1G0 1184 aaKnown RBP13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Skida1Q80YR3 822 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Rrnad1Q8BZG5 475 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Rdh16f2Q8K3M1 318 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Olfr1138Q8VFQ9 311 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Cd209cQ91ZW9 178 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Cep41Q99NF3 373 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 NubplQ9CWD8 319 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Exosc8Q9D753 276 aaKnown RBP13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Ppp1r35Q9D8C8 260 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Znf593Q9DB42 134 aaKnown RBP13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Vmn1r172Q9EPS4 313 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Sec61a2Q9JLR1 476 aa13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Ice1E9Q286 2241 aaKnown RBP13.22□□□□□ -0.29
Nup54-201ENSMUST00000038514 Tmem200bD3Z0P8 284 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Gm21818J3KMS6 170 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Grcc10O35127 126 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 FgrP14234 517 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Upk2P38575 184 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 AdmP97297 184 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Il12rb1Q60837 738 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Phox2aQ62066 280 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 HhipQ7TN16 700 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Acp7Q8BX37 438 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 MepeQ8K4L6 441 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Nt5mQ8VCE6 220 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Olfr1450Q8VF19 325 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Olfr1309Q8VF83 320 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Abhd3Q91ZH7 411 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 1700025F22RikQ9D9Y7 111 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Tcf23Q9JLR5 209 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Cx3cr1Q9Z0D9 354 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Loxhd1C8YR32 2068 aa13.21□□□□□ -0.29
Nup54-201ENSMUST00000038514 Fer1l4A3KGK3 1992 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm28102A0A087WQL3 222 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tex38A2A8T7 201 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm11756A2BEJ1 356 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Ankrd29D3YVV3 309 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Zfp944E9PUS4 492 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Vmn1r173E9Q8V7 313 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm20834J3QM72 227 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 DffbO54788 344 aaKnown RBP13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gpr33O88416 339 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 P01638 115 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Cbr2P08074 244 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Atp4bP50992 294 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Slc39a7Q31125 476 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 CstbQ62426 98 aaKnown RBP13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Pif1Q80SX8 650 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 SheQ8BSD5 492 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr1324Q8VEU7 332 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tmem205Q91XE8 189 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Edem1Q925U4 652 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Rtl8bQ9D1F0 113 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Wdr5bQ9D7H2 328 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Dnajc4Q9D844 244 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Ssna1Q9JJ94 119 aa13.21□□□□□ -0.3
Nup54-201ENSMUST00000038514 Lama2Q60675 3118 aaKnown RBP13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr267A2AM35 313 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Znf551B2RUI1 696 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Spink14B9EJP9 96 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Gm15737D3YZR0 106 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tspan15F7BWT7 294 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Trav13d-3J3QMG8 112 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Hoxb5P09079 269 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Hmx3P42581 356 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 S1pr2P52592 352 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Hist1h2baP70696 127 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Csnk2a1Q60737 391 aaKnown RBP13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 DbpQ60925 325 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Rsl1Q7M6Y1 485 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Rspo4Q8BJ73 228 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Las2Q8CB14 526 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Commd1Q8K4M5 188 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Olfr830Q8VFJ5 315 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Med6Q921D4 246 aaKnown RBP13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Sapcd1Q9CY86 146 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Ldlrad1D3YYZ1 218 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 HbzP06467 142 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Mdh2P08249 338 aaKnown RBP13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 GrprP21729 384 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Zfp36l2P23949 484 aaKnown RBP13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tmem71Q149F5 287 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Tmem69Q3KQJ0 245 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Wfdc6aQ3UW55 136 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Taf9bQ6NZA9 249 aa13.2□□□□□ -0.3
Nup54-201ENSMUST00000038514 Fam57bQ7TNV1 275 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms