RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Rtp4Q9ER80 249 aaKnown RBP4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Nudt3Q9JI46 168 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Sphk2Q9JIA7 617 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 RhcgQ9QXP0 498 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Ccr9Q9WUT7 369 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Bdp1Q571C7 2467 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr1097A2AVA9 315 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Gm14403A2BFU4 402 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Susd1E9Q3H4 752 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 AhsgP29699 345 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Rpl12P35979 165 aaKnown RBP4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Ppp1cbP62141 327 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Rbm38Q62176 237 aaKnown RBP4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Il17fQ7TNI7 161 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr804Q7TRH7 314 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Slc35c1Q8BLX4 363 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Ip6k3Q8BWD2 396 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr112Q8C0S2 320 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Mrpl38Q8K2M0 380 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Commd5Q8R395 224 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 ManfQ9CXI5 179 aaKnown RBP4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Slc46a3Q9DC26 460 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 CalyQ9DCA7 226 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Dok3Q9QZK7 444 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Wnk1P83741 2377 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr576A0A0G2JFH3 312 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Gm4175D3YTW8 314 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Vmn1r114L7N226 321 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Vmn1r126L7N2C8 321 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Edil3O35474 480 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Rab33bO35963 229 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr1537P34983 314 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Slc45a2P58355 530 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr1442Q0VEV7 312 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Ppp1r3cQ7TMB3 317 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Bpifb3Q80ZU7 473 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Cbln4Q8BME9 198 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Nit1Q8VDK1 323 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr1233Q8VGN0 305 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 TrirQ9D735 173 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Nova1Q9JKN6 507 aaKnown RBP4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Qtrt1Q9JMA2 403 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Plekhb1Q9QYE9 243 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 RgrQ9Z2B3 291 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Cdhr4H3BJZ2 783 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Vmn1r25H3BLP0 302 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Tyrp1P07147 537 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 H1f0P10922 194 aaKnown RBP4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 SftpcP21841 193 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Chrna7P49582 502 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 IhhP97812 411 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 PtafrQ62035 341 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Methig1Q76I26 264 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Spaca9Q7TPM5 168 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr1371Q7TQT7 311 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Cldn17Q8BXA6 224 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Lrtm1Q8BXQ3 356 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr994Q8VF73 314 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Lysmd1Q9D0E3 226 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Wdr20Q9D5R2 567 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Tmem27Q9ESG4 222 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr157Q9QZ20 318 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Tmem238lA0A1B0GS74 79 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr1191-ps1A0A1L1STD5 311 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Zfp334A2A4U6 679 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Lrp3E9Q1T6 790 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Zfp870J3QMA4 560 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr1513L7N457 313 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 C5ar1P30993 351 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Zic1P46684 447 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Gjb5Q02739 271 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Znf865Q3U3I9 1058 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Clec9aQ8BRU4 238 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 1700020N01RikQ8CF20 87 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Rdh1Q8CGV4 317 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Prr14lE9Q7C4 1971 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 4930435E12RikA6X8Z9 381 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Vmn1r149E9PWL6 307 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Vmn1r101E9Q365 307 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Vmn1r158G3UY92 307 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Gm10666K7N6B8 321 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Vmn1r121K7N6J4 314 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Siah2Q06986 325 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Rnf149Q3U2C5 394 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Fam220aQ3ZN08 260 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Rnase12Q5GAM8 145 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 PirtQ8BFY0 135 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Mmd2Q8R189 247 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Olfr678Q8VG26 313 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Wdr5bQ9D7H2 328 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Tex43Q9D9I1 141 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Ttc32Q9DAC7 148 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 SmpxQ9DC77 85 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Plp2Q9R1Q7 152 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Gvin1Q80SU7 2427 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Cep295Q8BQ48 2412 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Sec16aA2AIX1 2377 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Ighv1-24A0A0A6YY24 117 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Wfdc16A2A5H4 111 aa4.14□□□□□ -1.75
Prkdc-201ENSMUST00000023352 Prpmp5E9PXN1 296 aa4.14□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms