RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TRBV5-5A0A0J9YX44 114 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 H0YJX3 145 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SLC33A1O00400 549 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 MELTFP08582 738 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 OCMP0CE72 109 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 ATP6V1B1P15313 513 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 IGFBP3P17936 291 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 MYL12AP19105 171 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 MYF6P23409 242 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 WNT4P56705 351 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 GRK1Q15835 563 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SSX1Q16384 188 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SMIM21Q3B7S5 101 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SLC22A6Q4U2R8 563 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 PRAMEF5Q5TYX0 476 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 GPR157Q5UAW9 335 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 CCBE1Q6UXH8 406 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 NR2C2APQ86WQ0 139 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 PP6455Q8WZ26 134 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 C12orf43Q96C57 262 aaKnown RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 ZNF281Q9Y2X9 895 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 PCDHGB1Q9Y5G3 927 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 PRKDCP78527 4128 aaKnown RBP4.63□□□□□ -1.67
CPNE3-208ENST00000614678 J3QLI3 93 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 HTR3BO95264 441 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 ZNF44P15621 663 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 PRTN3P24158 256 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 SSTR5P35346 364 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 ATP1B3P54709 279 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 IRF3Q14653 427 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 ZBTB37Q5TC79 503 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 DDI2Q5TDH0 399 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 UTS2BQ765I0 119 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 TMEM219Q86XT9 240 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 LYPD6Q86Y78 171 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 C11orf44Q8N8P7 122 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 SPATA3Q8NHX4 192 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 DERL3Q96Q80 235 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 NICN1Q9BSH3 213 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 ING4Q9UNL4 249 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 DHRS7CA6NNS2 312 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 IFNL4K9M1U5 179 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 FSTL3O95633 263 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 SERPINA3P01011 423 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 LIPFP07098 398 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 TGFBR2P37173 567 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 OR10A3P58181 314 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 SIGIRRQ6IA17 410 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 PNLDC1Q8NA58 520 aaKnown RBP4.63□□□□□ -1.67
CPNE3-208ENST00000614678 SETD9Q8NE22 299 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 OR13A1Q8NGR1 328 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 PIFOQ8TCI5 191 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 GPR148Q8TDV2 347 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 CCDC107Q8WV48 283 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 TMEM158Q8WZ71 300 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 GPER1Q99527 375 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 PKIBQ9C010 78 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 COMMD4Q9H0A8 199 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 DUSP21Q9H596 190 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 PLCXD1Q9NUJ7 323 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 HILPDAQ9Y5L2 63 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 SNTNA6NMZ2 147 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 MYL12BO14950 172 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 GATBO75879 557 aaKnown RBP4.63□□□□□ -1.67
CPNE3-208ENST00000614678 CAV3P56539 151 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 ACTG1P63261 375 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 FABP5Q01469 135 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 JAGN1Q8N5M9 183 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 OR5D14Q8NGL3 314 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 OR52N1Q8NH53 320 aa4.63□□□□□ -1.67
CPNE3-208ENST00000614678 EXOSC1Q9Y3B2 195 aaKnown RBP4.63□□□□□ -1.67
CPNE3-208ENST00000614678 NOP16Q9Y3C1 178 aaKnown RBP4.63□□□□□ -1.67
CPNE3-208ENST00000614678 TRBV5-7A0A0A0MS05 114 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 IGHV3-43A0A0B4J1X8 118 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 NKX6-3A6NJ46 265 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 CHST1O43916 411 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 KDM4BO94953 1096 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 IGHV3-43DP0DP04 118 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 RAB3AP20336 220 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 GATA3P23771 443 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 ZNF93P35789 620 aaPredicted RBP4.62□□□□□ -1.67
CPNE3-208ENST00000614678 PTGFRP43088 359 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 EMX1Q04741 257 aaPredicted RBP4.62□□□□□ -1.67
CPNE3-208ENST00000614678 ZNF146Q15072 292 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 CNN3Q15417 329 aaKnown RBP4.62□□□□□ -1.67
CPNE3-208ENST00000614678 SPHARQ15513 63 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 TMEM95Q3KNT9 176 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 ACSM3Q53FZ2 586 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 OLFML2AQ68BL7 652 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 Q6YL49 198 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 TMPRSS11AQ6ZMR5 421 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 OR8H2Q8N162 312 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 ZNF561Q8N587 486 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 KIR3DL3Q8N743 410 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 C8orf46Q8TAG6 207 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 INPP5EQ9NRR6 644 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 ELF5Q9UKW6 265 aaPredicted RBP4.62□□□□□ -1.67
CPNE3-208ENST00000614678 POLDIP2Q9Y2S7 368 aa4.62□□□□□ -1.67
CPNE3-208ENST00000614678 SF3B6Q9Y3B4 125 aaKnown RBP4.62□□□□□ -1.67
CPNE3-208ENST00000614678 NPFFO15130 113 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms