RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 OR4S1Q8NGB4 309 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 GPR148Q8TDV2 347 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 C17orf50Q8WW18 174 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 RFT1Q96AA3 541 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 Q9H521 79 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 CNOT2Q9NZN8 540 aaKnown RBP16.81■□□□□ 0.28
TPM1-232ENST00000561425 RAB26Q9ULW5 256 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 SH2D1BO14796 132 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 MGST3O14880 152 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 ALDOBP05062 364 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 CRYBA1P05813 215 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 MYL12AP19105 171 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 OMGP23515 440 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 DUSP1P28562 367 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 OR3A1P47881 315 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 DMKNQ6E0U4 476 aaPredicted RBP16.8■□□□□ 0.28
TPM1-232ENST00000561425 ELP2Q6IA86 826 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 Q6P435 159 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 ASCL4Q6XD76 172 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 OR4F5Q8NH21 305 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 SMIM19Q96E16 107 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 GLS2Q9UI32 602 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 PSORS1C1Q9UIG5 152 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 VPREB3Q9UKI3 123 aa16.8■□□□□ 0.28
TPM1-232ENST00000561425 hADV38S2A0JD32 116 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 OR2H2O95918 312 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 OCM2P0CE71 109 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 OCMP0CE72 109 aaPredicted RBP16.79■□□□□ 0.28
TPM1-232ENST00000561425 CALCBP10092 127 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 RAB3AP20336 220 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 RAG2P55895 527 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 EDDM3BP56851 147 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 ST3GAL4Q11206 333 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 GRK1Q15835 563 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 GDPGP1Q6ZNW5 385 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 OR11H6Q8NGC7 330 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 OR51A2Q8NGJ7 313 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 OR5D18Q8NGL1 313 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 OR5R1Q8NH85 324 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 TSEN15Q8WW01 171 aaKnown RBP16.79■□□□□ 0.28
TPM1-232ENST00000561425 BEX1Q9HBH7 125 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 FKBP14Q9NWM8 211 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 ZNF281Q9Y2X9 895 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 LINC00312Q9Y6C7 94 aa16.79■□□□□ 0.28
TPM1-232ENST00000561425 A0A0G2JK05 382 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 TRBV5-5A0A0J9YX44 114 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 CLPSL1A2RUU4 121 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 EFCAB10A6NFE3 127 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 GPX5O75715 221 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 PAHP00439 452 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 HCKP08631 526 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 IGHV1-8P0DP01 117 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 RPS11P62280 158 aaKnown RBP eCLIP16.78■□□□□ 0.28
TPM1-232ENST00000561425 PPP1R35Q8TAP8 253 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 CORO2AQ92828 525 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 ZNF714Q96N38 554 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 EXOSC4Q9NPD3 245 aaKnown RBP16.78■□□□□ 0.28
TPM1-232ENST00000561425 GSTK1Q9Y2Q3 226 aa16.78■□□□□ 0.28
TPM1-232ENST00000561425 ODF3BA8MYP8 253 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 TSPAN9O75954 239 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 CSN2P05814 226 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 CD2P06729 351 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 GABRR1P24046 479 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 SOX2P48431 317 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 MTNR1BP49286 362 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 MED21Q13503 144 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 OLFML2AQ68BL7 652 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 CHST4Q8NCG5 386 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 OR51T1Q8NGJ9 327 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 PIFOQ8TCI5 191 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 GHSRQ92847 366 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 TMEM106AQ96A25 262 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 PGLYRP3Q96LB9 341 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 ANKRD60Q9BZ19 345 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 CHST6Q9GZX3 395 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 C16orf95Q9H693 158 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 ZNF696Q9H7X3 374 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 TAS2R4Q9NYW5 299 aa16.77■□□□□ 0.28
TPM1-232ENST00000561425 GABRPO00591 440 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 XPNPEP2O43895 674 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 CD1AP06126 327 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 TMEM225BP0DP42 221 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 IGFBP3P17936 291 aaPredicted RBP16.76■□□□□ 0.27
TPM1-232ENST00000561425 BMXP51813 675 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 P2RX3P56373 397 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 EDDM3AQ14507 147 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 PRR31Q5SQ13 230 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 LDLRAD2Q5SZI1 272 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 ZNF626Q68DY1 528 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 TPRX1Q8N7U7 411 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 OR13D1Q8NGV5 346 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 LINC01006Q8NI28 216 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 CPNE2Q96FN4 548 aaPredicted RBP16.76■□□□□ 0.27
TPM1-232ENST00000561425 SSX3Q99909 188 aa16.76■□□□□ 0.27
TPM1-232ENST00000561425 CHCHD3Q9NX63 227 aaKnown RBP16.76■□□□□ 0.27
TPM1-232ENST00000561425 UBE2J1Q9Y385 318 aaPredicted RBP16.76■□□□□ 0.27
TPM1-232ENST00000561425 BTBD17A6NE02 478 aa16.75■□□□□ 0.27
TPM1-232ENST00000561425 VGLL3A8MV65 326 aa16.75■□□□□ 0.27
TPM1-232ENST00000561425 SIRPB1O00241 398 aa16.75■□□□□ 0.27
TPM1-232ENST00000561425 SLC33A1O00400 549 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms