RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 IKZF2Q9UKS7 526 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 COPS3Q9UNS2 423 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 SNX5Q9Y5X3 404 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 IGKV1-27A0A075B6S5 117 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 TRBV2A0A0J9YWF9 115 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 SERPINE3A8MV23 424 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 IGHG2P01859 326 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 OSMP13725 252 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 ECI1P42126 302 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 OR3A1P47881 315 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 LUMP51884 338 aaPredicted RBP14.6□□□□□ -0.07
TPM1-226ENST00000560959 UBE2V2Q15819 145 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 FAM98BQ52LJ0 330 aaKnown RBP14.6□□□□□ -0.07
TPM1-226ENST00000560959 TEX38Q6PEX7 206 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 C16orf89Q6UX73 402 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 FAM58AQ8N1B3 248 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 MNTQ99583 582 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 DCLRE1BQ9H816 532 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 ZNF286AQ9HBT8 521 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 GTF2A1LQ9UNN4 478 aa14.6□□□□□ -0.07
TPM1-226ENST00000560959 SIRT4Q9Y6E7 314 aaPredicted RBP14.6□□□□□ -0.07
TPM1-226ENST00000560959 GATBO75879 557 aaKnown RBP14.59□□□□□ -0.07
TPM1-226ENST00000560959 SNRNP70P08621 437 aaKnown RBP14.59□□□□□ -0.07
TPM1-226ENST00000560959 LYL1P12980 280 aa14.59□□□□□ -0.07
TPM1-226ENST00000560959 ATP6V1B2P21281 511 aa14.59□□□□□ -0.07
TPM1-226ENST00000560959 KPNB1Q14974 876 aaKnown RBP14.59□□□□□ -0.07
TPM1-226ENST00000560959 ZNF322Q6U7Q0 402 aaPredicted RBP14.59□□□□□ -0.07
TPM1-226ENST00000560959 FOXRED2Q8IWF2 684 aa14.59□□□□□ -0.07
TPM1-226ENST00000560959 STPG2Q8N412 459 aa14.59□□□□□ -0.07
TPM1-226ENST00000560959 CCDC54Q8NEL0 328 aa14.59□□□□□ -0.07
TPM1-226ENST00000560959 OR4D6Q8NGJ1 314 aa14.59□□□□□ -0.07
TPM1-226ENST00000560959 CCDC182A6NF36 153 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 ENTPD6O75354 484 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 SERPINA3P01011 423 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 MRPL3P09001 348 aaKnown RBP14.58□□□□□ -0.08
TPM1-226ENST00000560959 CDX1P47902 265 aaPredicted RBP14.58□□□□□ -0.08
TPM1-226ENST00000560959 SLC35E3Q7Z769 313 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 DEFB107AQ8IZN7 70 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 C10orf35Q96D05 121 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 BORCS8Q96FH0 119 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 RCHY1Q96PM5 261 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 DUX3Q96PT4 197 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 APOL4Q9BPW4 351 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 GON7Q9BXV9 100 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 CHST5Q9GZS9 411 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 IL36RNQ9UBH0 155 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 ZNF256Q9Y2P7 627 aaPredicted RBP14.58□□□□□ -0.08
TPM1-226ENST00000560959 SMAD5-AS1Q9Y6J3 95 aa14.58□□□□□ -0.08
TPM1-226ENST00000560959 SH2D1BO14796 132 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 CYB5AP00167 134 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 GDNFP39905 211 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 PTGFRP43088 359 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 INSL3P51460 131 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 RAB25P57735 213 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 CXCR4P61073 352 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 PNLIPRP3Q17RR3 467 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 DRAM1Q8N682 238 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 RNF152Q8N8N0 203 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 DNAAF1Q8NEP3 725 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 OR9G1Q8NH87 305 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 RPEQ96AT9 228 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 ZNF556Q9HAH1 456 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 PLEKHA1Q9HB21 404 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 SLC25A19Q9HC21 320 aa14.57□□□□□ -0.08
TPM1-226ENST00000560959 RBFOX1Q9NWB1 397 aaKnown RBP14.57□□□□□ -0.08
TPM1-226ENST00000560959 AMMECR1Q9Y4X0 333 aaPredicted RBP14.57□□□□□ -0.08
TPM1-226ENST00000560959 FAM172BPA6NC97 362 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 SEC14L6B5MCN3 397 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 INMTO95050 263 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 CSN2P05814 226 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 RAP2AP10114 183 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 DUSP1P28562 367 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 NPBWR2P48146 333 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 TOMM40LQ969M1 308 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 CNN2Q99439 309 aaKnown RBP14.56□□□□□ -0.08
TPM1-226ENST00000560959 ELAC2Q9BQ52 826 aaKnown RBP14.56□□□□□ -0.08
TPM1-226ENST00000560959 HMG20AQ9NP66 347 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 TAGLN3Q9UI15 199 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 LINC00527Q9UJ94 153 aa14.56□□□□□ -0.08
TPM1-226ENST00000560959 ZNF729A6NN14 1252 aaPredicted RBP14.55□□□□□ -0.08
TPM1-226ENST00000560959 AP4M1O00189 453 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 SYT7O43581 403 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 OR2H2O95918 312 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 CST1P01037 141 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 TMEM11P17152 192 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 GLIPR1P48060 266 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 RBP2P50120 134 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 MNAT1P51948 309 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 ATP1B3P54709 279 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 AESQ08117 197 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 RBM39Q14498 530 aaKnown RBP14.55□□□□□ -0.08
TPM1-226ENST00000560959 CXorf66Q5JRM2 361 aaPredicted RBP14.55□□□□□ -0.08
TPM1-226ENST00000560959 LCNL1Q6ZST4 164 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 DHFR2Q86XF0 187 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 SBSPONQ8IVN8 264 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 OR8H3Q8N146 312 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 ARHGAP24Q8N264 748 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 OR56B4Q8NH76 319 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 HRASLS5Q96KN8 279 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 TTTY10Q9BZA0 68 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms