RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 RAB6AP20340 208 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 GABRR1P24046 479 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 LMO1P25800 156 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 DUSP1P28562 367 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 SOX6P35712 828 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 RBMXP38159 391 aaKnown RBP6.36□□□□□ -1.39
TDP1-214ENST00000556063 KCNJ3P48549 501 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 RORCP51449 518 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 CAV3P56539 151 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 CLDN12P56749 244 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 RBM11P57052 281 aaKnown RBP6.36□□□□□ -1.39
TDP1-214ENST00000556063 HOXA4Q00056 320 aaPredicted RBP6.36□□□□□ -1.39
TDP1-214ENST00000556063 COL10A1Q03692 680 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 SCN1BQ07699 218 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 HNRNPA0Q13151 305 aaKnown RBP6.36□□□□□ -1.39
TDP1-214ENST00000556063 BLMHQ13867 455 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 RBM39Q14498 530 aaKnown RBP6.36□□□□□ -1.39
TDP1-214ENST00000556063 TAF9Q16594 264 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 CTF1Q16619 201 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 C2orf76Q3KRA6 126 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 PAN3Q58A45 887 aaKnown RBP6.36□□□□□ -1.39
TDP1-214ENST00000556063 KIAA2026Q5HYC2 2103 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 IDNKQ5T6J7 187 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 WDR25Q64LD2 544 aaPredicted RBP6.36□□□□□ -1.39
TDP1-214ENST00000556063 LYPD2Q6UXB3 125 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 BTNL3Q6UXE8 466 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 SLC16A12Q6ZSM3 486 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 GDPD3Q7L5L3 318 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 GLCCI1Q86VQ1 547 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 CD177Q8N6Q3 437 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 FAM216BQ8N7L0 139 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 OR51D1Q8NGF3 324 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 ST8SIA4Q92187 359 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 AP3S1Q92572 193 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 FAM46BQ96A09 425 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 SLC25A28Q96A46 364 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 PTX4Q96A99 478 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 PHF21AQ96BD5 680 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 C1orf159Q96HA4 380 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 DMRTB1Q96MA1 342 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 GAFA1Q96PS6 74 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 NEDD4LQ96PU5 975 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 GFI1Q99684 422 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 NAA50Q9GZZ1 169 aaKnown RBP6.36□□□□□ -1.39
TDP1-214ENST00000556063 DCSTAMPQ9H295 470 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 BANF2Q9H503 90 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 RNF167Q9H6Y7 350 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 LIN7BQ9HAP6 207 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 ABRACLQ9P1F3 81 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 FBLN5Q9UBX5 448 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 LPAR3Q9UBY5 353 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 RAB22AQ9UL26 194 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 MAB21L2Q9Y586 359 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 ETV7Q9Y603 341 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 ARHGAP32A7KAX9 2087 aa6.36□□□□□ -1.39
TDP1-214ENST00000556063 LOC105371242A0A075B767 164 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 TRBV23-1A0A0A0MS06 115 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 PPIAL4CA0A0B4J2A2 164 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 A0A0G2JK05 382 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 A0A1W2PPH5 198 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 SMIM30A4D0T7 59 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 TMEM14DPA8MWL7 114 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 MCRIP1C9JLW8 97 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 ZNF701M0R085 212 aaPredicted RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 SIRPB1O00241 398 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 MGST3O14880 152 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 ENSAO43768 121 aaKnown RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 OR2H2O95918 312 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 TGFAP01135 160 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 TK1P04183 234 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 GLAP06280 429 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 CLEC2LP0C7M8 214 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 IGHV4-31P0DP07 118 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 SLC2A2P11168 524 aaPredicted RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 AMY2BP19961 511 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 FUT3P21217 361 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 GATA3P23771 443 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 RPS19P39019 145 aaKnown RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 CEBPDP49716 269 aaPredicted RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 DVL1P1P54792 670 aaPredicted RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 RPS27AP62979 156 aaKnown RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 LCN2P80188 198 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 DYNC1I2Q13409 638 aaKnown RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 ARL6IP1Q15041 203 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 GRK1Q15835 563 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 PIGYQ3MUY2 71 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 ATAD3CQ5T2N8 411 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 OR10K2Q6IF99 312 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 MZT2AQ6P582 158 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 BIVMQ86UB2 503 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 OR8H2Q8N162 312 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 CIARTQ8N365 385 aaPredicted RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 TEX29Q8N6K0 151 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 ZNRF1Q8ND25 227 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 MAPK1IP1LQ8NDC0 245 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 TMEM104Q8NE00 496 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 OR56B1Q8NGI3 324 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 NEK7Q8TDX7 302 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 ACOT12Q8WYK0 555 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 H1FXQ92522 213 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms