RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 GALP22466 123 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 GLRA1P23415 457 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 GADD45AP24522 165 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 GABRA2P47869 451 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 RAB13P51153 203 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 ERVFRD-1P60508 538 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 GMFBP60983 142 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 ACTA2P62736 377 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 RPL31P62899 125 aaKnown RBP10.86□□□□□ -0.67
CDX2-202ENST00000548877 ACTG2P63267 376 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 PRDX4Q13162 271 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 TPBGQ13641 420 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 GALEQ14376 348 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 LDLRAD2Q5SZI1 272 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 TMEM200BQ69YZ2 307 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 TMEM219Q86XT9 240 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 TMEM185AQ8NFB2 350 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 OR2T27Q8NH04 317 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 HPSE2Q8WWQ2 592 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 NMNAT2Q9BZQ4 307 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 STUB1Q9UNE7 303 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 SSR3Q9UNL2 185 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 A3GALT2U3KPV4 340 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 DSCAML1Q8TD84 2053 aa10.86□□□□□ -0.67
CDX2-202ENST00000548877 A0A1W2PRX2 142 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 C17orf98A8MV24 154 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 FAM90A22PA8MWA6 464 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 MTRF1O75570 445 aaKnown RBP10.85□□□□□ -0.67
CDX2-202ENST00000548877 ANXA2P07355 339 aaKnown RBP10.85□□□□□ -0.67
CDX2-202ENST00000548877 SPARCP09486 303 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 ZNF182P17025 639 aaPredicted RBP10.85□□□□□ -0.67
CDX2-202ENST00000548877 SPI1P17947 270 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 ACKR3P25106 362 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 DLX6P56179 175 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 SPCS2Q15005 226 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 TRAM1Q15629 374 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 ZNF322Q6U7Q0 402 aaPredicted RBP10.85□□□□□ -0.67
CDX2-202ENST00000548877 LINC00482Q8N8I6 264 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 OR10H4Q8NGA5 316 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 OR11H6Q8NGC7 330 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 RNF133Q8WVZ7 376 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 RNF170Q96K19 258 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 ALG8Q9BVK2 526 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 OR10A2Q9H208 303 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 OR51I2Q9H344 312 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 MED20Q9H944 212 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 ADGRL4Q9HBW9 690 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 ABCB10Q9NRK6 738 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 RASL12Q9NYN1 266 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 CCDC59Q9P031 241 aaKnown RBP10.85□□□□□ -0.67
CDX2-202ENST00000548877 GSTK1Q9Y2Q3 226 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 U3KQK5 164 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 DNAH7Q8WXX0 4024 aa10.85□□□□□ -0.67
CDX2-202ENST00000548877 STAB2Q8WWQ8 2551 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 EPPK1P58107 5090 aaKnown RBP10.84□□□□□ -0.67
CDX2-202ENST00000548877 LOC100506127A0A0U1RQW1 187 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 ZNF850A8MQ14 1090 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 RBP4P02753 201 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 COX7A1P24310 79 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 AZGP1P25311 298 aaKnown RBP10.84□□□□□ -0.67
CDX2-202ENST00000548877 SOX6P35712 828 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 ZNF121P58317 390 aaPredicted RBP10.84□□□□□ -0.67
CDX2-202ENST00000548877 VBP1P61758 197 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 MRPL28Q13084 256 aaKnown RBP10.84□□□□□ -0.67
CDX2-202ENST00000548877 TMEM95Q3KNT9 176 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 ZNF626Q68DY1 528 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 FAM57BQ71RH2 274 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 LHFPL3Q86UP9 236 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 SYS1Q8N2H4 156 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 ZNF511Q8NB15 262 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 OR51L1Q8NGJ5 315 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 DYNC2LI1Q8TCX1 351 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 ITFG2Q969R8 447 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 CHCHD6Q9BRQ6 235 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 DCSTAMPQ9H295 470 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 BABAM2Q9NXR7 383 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 TMEM14AQ9Y6G1 99 aa10.84□□□□□ -0.67
CDX2-202ENST00000548877 TCRBV4S1A1TA0A5B7 111 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 APOL3O95236 402 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 CCL3L1P16619 93 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 HSD11B1P28845 292 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 HOXD3P31249 432 aaPredicted RBP10.83□□□□□ -0.68
CDX2-202ENST00000548877 OPRL1P41146 370 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 GNG3P63215 75 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 SSX1Q16384 188 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 SSX2Q16385 188 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 LINC01590Q5TEZ4 76 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 LIPKQ5VXJ0 399 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 C16orf82Q7Z2V1 217 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 KCTD20Q7Z5Y7 419 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 SLC35F2Q8IXU6 374 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 ZDHHC23Q8IYP9 409 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 ZNF561Q8N587 486 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 ZNF485Q8NCK3 441 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 OR6K6Q8NGW6 343 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 ZNF671Q8TAW3 534 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 S100ZQ8WXG8 99 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 DPF1Q92782 380 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 TENM2Q9NT68 2774 aa10.83□□□□□ -0.68
CDX2-202ENST00000548877 ZNF670-ZNF695F2Z2N8 137 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms