RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	STX3	Q13277	289 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	GTDC1	Q4AE62	458 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	WDR38	Q5JTN6	314 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	METAP1D	Q6UB28	335 aa	Predicted RBP	4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	FBXW12	Q6X9E4	464 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	ERAS	Q7Z444	233 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	CLDN22	Q8N7P3	220 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	POC1A	Q8NBT0	407 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	WFDC9	Q8NEX5	89 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR4F17	Q8NGA8	305 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR2T6	Q8NHC8	308 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	ADAMTS16	Q8TE57	1224 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	AEN	Q8WTP8	325 aa	Known RBP	4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	HPSE2	Q8WWQ2	592 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	LIPH	Q8WWY8	451 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	TMEM37	Q8WXS4	190 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	TECTB	Q96PL2	329 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR4F4	Q96R69	305 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	SORT1	Q99523	831 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	WFDC6	Q9BQY6	131 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	KRTAP4-8	Q9BYQ9	185 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	TMEM38A	Q9H6F2	299 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	WDR76	Q9H967	626 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	TECR	Q9NZ01	308 aa	Known RBP	4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	RNF7	Q9UBF6	113 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	LGALS13	Q9UHV8	139 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	MRPS7	Q9Y2R9	242 aa	Known RBP	4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	GMEB1	Q9Y692	573 aa		4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	TET2	Q6N021	2002 aa	Predicted RBP	4.88	□□□□□ -1.63
CPSF7-222	ENST00000544585	IGKV1D-43	A0A0B4J1Z2	117 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	CPSF4L	A6NMK7	179 aa	Known RBP	4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	IQCF6	A8MYZ5	107 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585		F5H5P2	479 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	UBD	O15205	165 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	SGCE	O43556	437 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	LYPD3	O95274	346 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	PPP1R3D	O95685	299 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	TSPAN19	P0C672	248 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	GPX2	P18283	190 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	FCGR2B	P31994	310 aa	Predicted RBP	4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	PMEL	P40967	661 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	AQP2	P41181	271 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	RBM34	P42696	430 aa	Known RBP	4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	HTR5A	P47898	357 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	EFNB2	P52799	333 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	RPL27	P61353	136 aa	Known RBP	4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	IFFO1	Q0D2I5	559 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	HNRNPA0	Q13151	305 aa	Known RBP	4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	RIPK1	Q13546	671 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	DUSP7	Q16829	419 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	IZUMO4	Q1ZYL8	232 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	FAM106A	Q4KMX7	169 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	FAM201A	Q5SY85	155 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR2T2	Q6IF00	324 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	COMTD1	Q86VU5	262 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR5AS1	Q8N127	324 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR52M1	Q8NGK5	317 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR6T1	Q8NGN1	323 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	FCAMR	Q8WWV6	532 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	RASSF5	Q8WWW0	418 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	SGTB	Q96EQ0	304 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	ZNF426	Q9BUY5	554 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	SLC22A4	Q9H015	551 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	PPA2	Q9H2U2	334 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	FN3KRP	Q9HA64	309 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	RAB18	Q9NP72	206 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	MEPE	Q9NQ76	525 aa	Predicted RBP	4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	ZNRD1	Q9P1U0	126 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	NOP16	Q9Y3C1	178 aa	Known RBP	4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	TANC2	Q9HCD6	1990 aa		4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585	EPPK1	P58107	5090 aa	Known RBP	4.87	□□□□□ -1.63
CPSF7-222	ENST00000544585		A6NIZ1	184 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	SRRM4	A7MD48	611 aa	Known RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	KPNA4	O00629	521 aa	Predicted RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	FBP2	O00757	339 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	SHOX2	O60902	331 aa	Predicted RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR7A10	O76100	309 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	PAH	P00439	452 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	THY1	P04216	161 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	GLRA1	P23415	457 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	CD200	P41217	278 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	RAP1B	P61224	184 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	LSM6	P62312	80 aa	Known RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	RAP1A	P62834	184 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	FMOD	Q06828	376 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	MAB21L1	Q13394	359 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	ENDOG	Q14249	297 aa	Known RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	DDI2	Q5TDH0	399 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	NCR3LG1	Q68D85	454 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	C1orf94	Q6P1W5	598 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	CALHM3	Q86XJ0	350 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	NDUFA11	Q86Y39	141 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	ZDHHC21	Q8IVQ6	265 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	MREG	Q8N565	214 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	STPG4	Q8N801	248 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	ADAD2	Q8NCV1	583 aa	Known RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR10AD1	Q8NGE0	317 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR4D10	Q8NGI6	311 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR4C13	Q8NGP0	309 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR1F12	Q8NHA8	337 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms