RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 UVRAGQ9P2Y5 699 aa2.42□□□□□ -2.02
SCFD1-207ENST00000544052 PPIL1Q9Y3C6 166 aa2.42□□□□□ -2.02
SCFD1-207ENST00000544052 KCNE3Q9Y6H6 103 aa2.42□□□□□ -2.02
SCFD1-207ENST00000544052 CACNA1DQ01668 2161 aa2.42□□□□□ -2.02
SCFD1-207ENST00000544052 LRRK2Q5S007 2527 aa2.42□□□□□ -2.02
SCFD1-207ENST00000544052 USP9YO00507 2555 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-207ENST00000544052 HEATR5BQ9P2D3 2071 aa2.42□□□□□ -2.02
SCFD1-207ENST00000544052 CPAMD8Q8IZJ3 1885 aa2.42□□□□□ -2.02
SCFD1-207ENST00000544052 CSMD1Q96PZ7 3565 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 A0A087X0T9 212 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 GOLGA8QA0A0J9YX86 632 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 A0A0J9YYE9 177 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 INS-IGF2F8WCM5 200 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TMX2-CTNND1H3BSU7 103 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 J3QKU1 62 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 DFFAO00273 331 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 NME4O00746 187 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 POLR1CO15160 346 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 CBR3O75828 277 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TRBC1P01850 177 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 HLA-DQB2P05538 268 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 HOXC4P09017 264 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 FAM228BP0C875 321 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 THRAP10827 490 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 LIPCP11150 499 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 GPR1P46091 355 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 LCN2P80188 198 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 CDH17Q12864 832 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 NCF4Q15080 339 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 ZNF658BQ4V348 819 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TPTE2P1Q5T6R2 138 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 METTL21CQ5VZV1 264 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 CEMP1Q6PRD7 247 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 ARL9Q6T311 187 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 NPSR1Q6W5P4 371 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 OR5T3Q8NGG3 340 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 LRRC20Q8TCA0 184 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 SLC37A2Q8TED4 501 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 NAT14Q8WUY8 206 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 NAT6Q93015 286 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TMEM230Q96A57 120 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 ARL5BQ96KC2 179 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TRIB3Q96RU7 358 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 UQCC2Q9BRT2 126 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 CHAC1Q9BUX1 264 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 EDA2RQ9HAV5 297 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 MRM3Q9HC36 420 aaKnown RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 CLN6Q9NWW5 311 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 STX18Q9P2W9 335 aaKnown RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 ZNF223Q9UK11 482 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 MN1Q10571 1320 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 SPTBN1Q01082 2364 aaKnown RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 ZGRF1Q86YA3 2104 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 IGLV11-55A0A075B6I3 123 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 H7C417 338 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 GABRPO00591 440 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TNFP01375 233 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 GYPCP04921 128 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TLX1NBP0CAT3 122 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 RAB4AP20338 218 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 HCAR3P49019 387 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 UBE2AP49459 152 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 STC1P52823 247 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 GFERP55789 205 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 KRTAP10-3P60369 221 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 ATP6V0D1P61421 351 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 AP1S1P61966 158 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 PPP1CAP62136 330 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 GINS1Q14691 196 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 ELOCQ15369 112 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TSC22D1Q15714 1073 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 PYCR3Q53H96 274 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 HENMT1Q5T8I9 393 aaKnown RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 DCUN1D2Q6PH85 259 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 CLEC18BQ6UXF7 455 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 MBOAT2Q6ZWT7 520 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 GKN2Q86XP6 184 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 FAM58AQ8N1B3 248 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TRAM1L1Q8N609 369 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 SNX31Q8N9S9 440 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 INO80EQ8NBZ0 244 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 TMEM104Q8NE00 496 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 FBXO36Q8NEA4 188 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 RPEQ96AT9 228 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 KCNS3Q9BQ31 491 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 ZC4H2Q9NQZ6 224 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 MTFP1Q9UDX5 166 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 SLC23A2Q9UGH3 650 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 SLC22A14Q9Y267 594 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 WSB1Q9Y6I7 421 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 ESPL1Q14674 2120 aa2.41□□□□□ -2.02
SCFD1-207ENST00000544052 PRRC2AP48634 2157 aaKnown RBP2.41□□□□□ -2.02
SCFD1-207ENST00000544052 A0A1W2PRD5 423 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 NIPSNAP2O75323 286 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 ENTPD5O75356 428 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 APOA1P02647 267 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 PIRTP0C851 137 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 CTSEP14091 401 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 NQO2P16083 231 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms