RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GSDMCQ9BYG8 508 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 IMUPQ9GZP8 106 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 TMEM117Q9H0C3 514 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 PXMP2Q9NR77 195 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 BLOC1S4Q9NUP1 217 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 FAM215AQ9Y5M1 114 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 COMMD10Q9Y6G5 202 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 PLXND1Q9Y4D7 1925 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 MYO7BQ6PIF6 2116 aa-2.51□□□□□ -2.81
RNU6-542P-201ENST00000516405 PKD1P98161 4303 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 IGHV3-73A0A0B4J1V6 119 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 TMEM235A6NFC5 223 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 NCBP2LA6PVI3 153 aaKnown RBP-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 SYCE1LA8MT33 242 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 HMSDA8MTL9 139 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 SLC17A3O00476 420 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 MED7O43513 233 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 ORC5O43913 435 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 MPZL2O60487 215 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 OR2J3O76001 311 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 DIRAS1O95057 198 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 TDP2O95551 362 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 FGGP02679 453 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 HSP90AB1P08238 724 aaKnown RBP-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 GGT2P36268 569 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 SNU13P55769 128 aaKnown RBP-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 SCN1BQ07699 218 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 IFFO1Q0D2I5 559 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 TRDNQ13061 729 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 TMEM95Q3KNT9 176 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 UBE2UQ5VVX9 321 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 TMEM220Q6QAJ8 160 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 PRNTQ86SH4 94 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 LHFPL1Q86WI0 220 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 GABRG1Q8N1C3 465 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 CXorf40AQ8TE69 158 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 PRSS27Q9BQR3 290 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 EMC6Q9BV81 110 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 MRM3Q9HC36 420 aaKnown RBP-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 RBM22Q9NW64 420 aaKnown RBP eCLIP-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 OR5AC2Q9NZP5 309 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 GTF2A1LQ9UNN4 478 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 B9D1Q9UPM9 204 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 ABCC4O15439 1325 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 TONSLQ96HA7 1378 aa-2.52□□□□□ -2.81
RNU6-542P-201ENST00000516405 UNC13CQ8NB66 2214 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 IBA57-AS1B1ANH7 110 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 CLDN5O00501 218 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 PRKAB2O43741 272 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 DNAJB6O75190 326 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 B3GALNT1O75752 331 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 NEBLO76041 1014 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 KRT16P08779 473 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 RALAP11233 206 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 NQO1P15559 274 aaKnown RBP-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 FUT1P19526 365 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 NT5EP21589 574 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 MEP1BQ16820 701 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 ZCWPW2Q504Y3 356 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 HENMT1Q5T8I9 393 aaKnown RBP-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 C4orf50Q6ZRC1 276 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 FAM43BQ6ZT52 329 aaPredicted RBP-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 DPPA2Q7Z7J5 298 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 CYP4Z1Q86W10 505 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 SLC38A6Q8IZM9 456 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 FAM83FQ8NEG4 500 aaPredicted RBP-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 FIBINQ8TAL6 211 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 THRSPQ92748 146 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 MRPL48Q96GC5 212 aaKnown RBP-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 UPK3BQ9BT76 320 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 NUP58Q9BVL2 599 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 BFARQ9NZS9 450 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 FBXW2Q9UKT8 454 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 LIPT1Q9Y234 373 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 GOLT1BQ9Y3E0 138 aa-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 ZNF706Q9Y5V0 76 aaPredicted RBP-2.53□□□□□ -2.81
RNU6-542P-201ENST00000516405 PPRC1Q5VV67 1664 aaKnown RBP-2.53□□□□□ -2.82
RNU6-542P-201ENST00000516405 PTPRFP10586 1907 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 A0A1B0GWJ7 208 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 PHYHO14832 338 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 TCF21O43680 179 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 GYPCP04921 128 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 PSMA2P25787 234 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 MIPP30301 263 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 CLNS1AP54105 237 aaKnown RBP-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 LRRC26Q2I0M4 334 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 CHCHD2P9Q5T1J5 151 aaPredicted RBP-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 LPCAT4Q643R3 524 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 KDELC1Q6UW63 502 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 PDIK1LQ8N165 341 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 C17orf78Q8N4C9 275 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 CBR4Q8N4T8 237 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 CCDC89Q8N998 374 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 OR8J1Q8NGP2 316 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 RHEBL1Q8TAI7 183 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 ITFG2Q969R8 447 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 CMBLQ96DG6 245 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 PKNOX2Q96KN3 472 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 C7orf34Q96L11 122 aa-2.54□□□□□ -2.82
RNU6-542P-201ENST00000516405 TBX5Q99593 518 aa-2.54□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms