RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 A8MXK9 166 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 ZNF701M0R085 212 aaPredicted RBP16.72■□□□□ 0.27
USP53-203ENST00000507597 DVL1O14640 695 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 SCGNO76038 276 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 OR2H2O95918 312 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 NDUFB7P17568 137 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 RAB6AP20340 208 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 LMO1P25800 156 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 RBMXP38159 391 aaKnown RBP16.72■□□□□ 0.27
USP53-203ENST00000507597 RPS19P39019 145 aaKnown RBP16.72■□□□□ 0.27
USP53-203ENST00000507597 HOXA4Q00056 320 aaPredicted RBP16.72■□□□□ 0.27
USP53-203ENST00000507597 RBM39Q14498 530 aaKnown RBP16.72■□□□□ 0.27
USP53-203ENST00000507597 GDPD3Q7L5L3 318 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 CD177Q8N6Q3 437 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 ACOT12Q8WYK0 555 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 ST8SIA4Q92187 359 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 ISOC1Q96CN7 298 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 DMRTB1Q96MA1 342 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 BANF2Q9H503 90 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 ETV7Q9Y603 341 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 TEX15Q9BXT5 2789 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 TRAV20A0A0B4J274 112 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 A0A0G2JK05 382 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 A0A1W2PPH5 198 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 K7N7A8 449 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 TK1P04183 234 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 GLAP06280 429 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 LIPFP07098 398 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 INHBBP09529 407 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 CLEC2LP0C7M8 214 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 GATA3P23771 443 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 DUSP1P28562 367 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 CLDN12P56749 244 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 RPS27AP62979 156 aaKnown RBP16.71■□□□□ 0.27
USP53-203ENST00000507597 DYNC1I2Q13409 638 aaKnown RBP16.71■□□□□ 0.27
USP53-203ENST00000507597 MZT2AQ6P582 158 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 OR56B1Q8NGI3 324 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 FAM46BQ96A09 425 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 PHF21AQ96BD5 680 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 C1orf147Q96MC9 270 aaPredicted RBP16.71■□□□□ 0.27
USP53-203ENST00000507597 NEDD4LQ96PU5 975 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 BARHL1Q9BZE3 327 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 LPAR3Q9UBY5 353 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 RSL24D1Q9UHA3 163 aaKnown RBP16.71■□□□□ 0.27
USP53-203ENST00000507597 MAB21L2Q9Y586 359 aa16.71■□□□□ 0.27
USP53-203ENST00000507597 LOC105371242A0A075B767 164 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 PPIAL4CA0A0B4J2A2 164 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 SMIM30A4D0T7 59 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 MCRIP1C9JLW8 97 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 SIRPB1O00241 398 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 MGST3O14880 152 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 GEMIN2O14893 280 aaKnown RBP16.7■□□□□ 0.26
USP53-203ENST00000507597 MSMBP08118 114 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 ARL6IP1Q15041 203 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 TAF9Q16594 264 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 PIGYQ3MUY2 71 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 ATAD3CQ5T2N8 411 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 BTNL3Q6UXE8 466 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 ZNF841Q6ZN19 808 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 GLCCI1Q86VQ1 547 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 OR8H2Q8N162 312 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 FAM216BQ8N7L0 139 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 ZNRF1Q8ND25 227 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 MAPK1IP1LQ8NDC0 245 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 TMEM104Q8NE00 496 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 Q96M66 194 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 TMUB1Q9BVT8 246 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 TM2D1Q9BX74 207 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 CTSZQ9UBR2 303 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 POLR3KQ9Y2Y1 108 aaPredicted RBP16.7■□□□□ 0.26
USP53-203ENST00000507597 CEPT1Q9Y6K0 416 aa16.7■□□□□ 0.26
USP53-203ENST00000507597 TRBV23-1A0A0A0MS06 115 aa16.69■□□□□ 0.26
USP53-203ENST00000507597 SLC2A2P11168 524 aaPredicted RBP16.69■□□□□ 0.26
USP53-203ENST00000507597 AMY2BP19961 511 aa16.69■□□□□ 0.26
USP53-203ENST00000507597 FUT3P21217 361 aa16.69■□□□□ 0.26
USP53-203ENST00000507597 QRFPP83859 136 aa16.69■□□□□ 0.26
USP53-203ENST00000507597 GRK1Q15835 563 aa16.69■□□□□ 0.26
USP53-203ENST00000507597 PAN3Q58A45 887 aaKnown RBP16.69■□□□□ 0.26
USP53-203ENST00000507597 Q6P435 159 aa16.69■□□□□ 0.26
USP53-203ENST00000507597 NR2C2APQ86WQ0 139 aa16.69■□□□□ 0.26
USP53-203ENST00000507597 IL36RNQ9UBH0 155 aa16.69■□□□□ 0.26
USP53-203ENST00000507597 SPATA2Q9UM82 520 aa16.69■□□□□ 0.26
USP53-203ENST00000507597 TMEM272A0A1B0GTI8 110 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 A0A1W2PP11 408 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 ENSAO43768 121 aaKnown RBP16.68■□□□□ 0.26
USP53-203ENST00000507597 TGFAP01135 160 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 CSN2P05814 226 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 IGHV4-31P0DP07 118 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 ZNF182P17025 639 aaPredicted RBP16.68■□□□□ 0.26
USP53-203ENST00000507597 ERP29P30040 261 aaKnown RBP16.68■□□□□ 0.26
USP53-203ENST00000507597 IL2RGP31785 369 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 TGFBR1P36897 503 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 CEBPDP49716 269 aaPredicted RBP16.68■□□□□ 0.26
USP53-203ENST00000507597 LCN2P80188 198 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 OR10K2Q6IF99 312 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 RAB12Q6IQ22 244 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 BIVMQ86UB2 503 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 TEX29Q8N6K0 151 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 NEK7Q8TDX7 302 aa16.68■□□□□ 0.26
USP53-203ENST00000507597 H1FXQ92522 213 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms