RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	KRTAP10-9	P60411	292 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	IL13RA1	P78552	427 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	ZNF45	Q02386	682 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	PNLIPRP3	Q17RR3	467 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	ATAD3C	Q5T2N8	411 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	PYHIN1	Q6K0P9	492 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	CNIH2	Q6PI25	160 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	PRSS57	Q6UWY2	283 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973		Q6ZTK2	550 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	OR5D13	Q8NGL4	314 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	ANGPTL6	Q8NI99	470 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	SDSL	Q96GA7	329 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	LIME1	Q9H400	295 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	KCNK15	Q9H427	330 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	PLEKHJ1	Q9NW61	149 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	KAAG1	Q9UBP8	84 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	MIOX	Q9UGB7	285 aa		11.35	□□□□□ -0.59
APTX-231	ENST00000494973	UTP20	O75691	2785 aa	Known RBP	11.34	□□□□□ -0.59
APTX-231	ENST00000494973	RAB27B	O00194	218 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	GPR37	O15354	613 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	SIGLEC5	O15389	551 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	OR2H2	O95918	312 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	CSN2	P05814	226 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	SLC25A16	P16260	332 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	HIST1H1D	P16402	221 aa	Known RBP	11.34	□□□□□ -0.59
APTX-231	ENST00000494973	CDK2	P24941	298 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	CHAT	P28329	748 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	TNFSF8	P32971	234 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	GABRA2	P47869	451 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	NPY4R	P50391	375 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	EFNB2	P52799	333 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	SNU13	P55769	128 aa	Known RBP	11.34	□□□□□ -0.59
APTX-231	ENST00000494973	ZMYND11	Q15326	602 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	C11orf91	Q3C1V1	193 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	PAN3	Q58A45	887 aa	Known RBP	11.34	□□□□□ -0.59
APTX-231	ENST00000494973	HIST2H2BC	Q6DN03	193 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.34	□□□□□ -0.59
APTX-231	ENST00000494973	ZNF788	Q6ZQV5	615 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	BATF2	Q8N1L9	274 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	ZNF525	Q8N782	197 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	NRGN	Q92686	78 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	RAB39B	Q96DA2	213 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	SNX22	Q96L94	193 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	WDR12	Q9GZL7	423 aa	Known RBP	11.34	□□□□□ -0.59
APTX-231	ENST00000494973	MIXL1	Q9H2W2	232 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	RIMS4	Q9H426	269 aa	Predicted RBP	11.34	□□□□□ -0.59
APTX-231	ENST00000494973	ZNF222	Q9UK12	451 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	PCDHB10	Q9UN67	800 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	ARID1A	O14497	2285 aa		11.34	□□□□□ -0.59
APTX-231	ENST00000494973	NAV2	Q8IVL1	2488 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	IGKV1D-17	A0A075B6S4	117 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	FABP12	A6NFH5	140 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.33	□□□□□ -0.6
APTX-231	ENST00000494973	MGST3	O14880	152 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	NDUFS7	O75251	213 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	LY6H	O94772	140 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	RPS2	P15880	293 aa	Known RBP	11.33	□□□□□ -0.6
APTX-231	ENST00000494973	TAS2R20	P59543	309 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	PAX5	Q02548	391 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	SCN1B	Q07699	218 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	IL18	Q14116	193 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	LRRC10	Q5BKY1	277 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	NKAPL	Q5M9Q1	402 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973		Q6P435	159 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	CCDC190	Q86UF4	302 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	ASCC1	Q8N9N2	400 aa	Known RBP	11.33	□□□□□ -0.6
APTX-231	ENST00000494973	DEFB108B	Q8NET1	73 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	OR4M1	Q8NGD0	313 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	OR8B3	Q8NGG8	313 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	NEK7	Q8TDX7	302 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	OR8B2	Q96RD0	313 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	NICN1	Q9BSH3	213 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	DPCD	Q9BVM2	203 aa	Predicted RBP	11.33	□□□□□ -0.6
APTX-231	ENST00000494973	SCPEP1	Q9HB40	452 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	TMEM165	Q9HC07	324 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	DCAF16	Q9NXF7	216 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	LPAR3	Q9UBY5	353 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	ANKRD17	O75179	2603 aa	Known RBP	11.33	□□□□□ -0.6
APTX-231	ENST00000494973	UNC79	Q9P2D8	2635 aa		11.33	□□□□□ -0.6
APTX-231	ENST00000494973	DCHS2	Q6V1P9	2916 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	TRAV18	A0A075B6X5	111 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	IGHV3OR15-7	A0A075B7D8	119 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	LYNX1	G3V0Z9	82 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	SIRPB1	O00241	398 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	SULT1C2	O00338	296 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	SLC33A1	O00400	549 aa	Predicted RBP	11.32	□□□□□ -0.6
APTX-231	ENST00000494973	MFNG	O00587	321 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	TMPRSS2	O15393	492 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	SOCS1	O15524	211 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	ADAM20	O43506	726 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	NDUFB3	O43676	98 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	GYPA	P02724	150 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	LYNX1	P0DP58	116 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	DUSP1	P28562	367 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	CBX5	P45973	191 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	GNG2	P59768	71 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	COL10A1	Q03692	680 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	FAM201A	Q5SY85	155 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	FAM131A	Q6UXB0	335 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	MOB1B	Q7L9L4	216 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms