RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 EIF5AP63241 154 aaKnown RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 HBA1P69905 142 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 CD47Q08722 323 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 C2orf80Q0P641 193 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 KLF5Q13887 457 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 JOSD1Q15040 202 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 RAB35Q15286 201 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 NSDHLQ15738 373 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 POU2AF1Q16633 256 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM241Q24JQ0 296 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 LGALSLQ3ZCW2 172 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 GLYR1Q49A26 553 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ACSM3Q53FZ2 586 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 MS4A13Q5J8X5 152 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 SAMD4BQ5PRF9 694 aaKnown RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 IDNKQ5T6J7 187 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 GLYATQ6IB77 296 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR2A2Q6IF42 318 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR52W1Q6IF63 320 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 FAM131AQ6UXB0 335 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 TMPPEQ6ZT21 453 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 PAQR9Q6ZVX9 377 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 DPY19L4Q7Z388 723 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 CBWD2Q8IUF1 395 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 STHQ8IWL8 128 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR6V1Q8N148 313 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF664Q8N3J9 261 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ZSCAN4Q8NAM6 433 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ST6GALNAC3Q8NDV1 305 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR4C5Q8NGB2 326 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR4D5Q8NGN0 318 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR10D4PQ8NGN7 298 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR1L6Q8NGR2 347 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 LINC01006Q8NI28 216 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF564Q8TBZ8 553 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 RDH11Q8TC12 318 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 HIST1H2BAQ96A08 127 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 CCDC126Q96EE4 140 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 TGM7Q96PF1 710 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR5B12Q96R08 314 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR7D2Q96RA2 312 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 IL4I1Q96RQ9 567 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 TP53RKQ96S44 253 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 S100A13Q99584 98 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 SDHCQ99643 169 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ARHGDIGQ99819 225 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 FAM173AQ9BQD7 235 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 GPR174Q9BXC1 333 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ACTR3CQ9C0K3 210 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 CST9LQ9H4G1 147 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 TUBA4BQ9H853 241 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ACTR8Q9H981 624 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 SGK2Q9HBY8 427 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 FBXO6Q9NRD1 293 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 SLC2A8Q9NY64 477 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 COMMD3Q9UBI1 195 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF391Q9UJN7 358 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 FARSAQ9Y285 508 aaKnown RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 NCKAP5O14513 1909 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ATAD5Q96QE3 1844 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ABCA3Q99758 1704 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 RIMBP3CA6NJZ7 1639 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 RIMBP3BA6NNM3 1639 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 SLIT3O75094 1523 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 SCN9AQ15858 1988 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 LAMB1P07942 1786 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 USP54Q70EL1 1684 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CHD3Q12873 2000 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 NWD1Q149M9 1564 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 MRC1P22897 1456 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 NUP153P49790 1475 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 ROBO3Q96MS0 1386 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 C4AP0C0L4 1744 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 C4BP0C0L5 1744 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SIGLEC1Q9BZZ2 1709 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TRAV8-7A0A075B6U6 113 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PPIAL4EA0A075B759 164 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PPIAL4CA0A0B4J2A2 164 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM269A0A1B0GVZ9 245 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 IGSF23A1L1A6 192 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SMCO3A2RU48 225 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 MBLAC1A4D2B0 266 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 NKX2-6A6NCS4 301 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PRORSD1PA6NEY8 169 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 OR6C6A6NF89 314 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 FRG2CA6NGY1 282 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF726A6NNF4 738 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 BTNL10A8MVZ5 291 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PPIAL4DF5H284 164 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 GPR31O00270 319 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CYB561D2O14569 222 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 RFXANKO14593 260 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SH2D1BO14796 132 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 XRCC2O43543 280 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PDE6DO43924 150 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 MFSD11O43934 449 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 UTS2O95399 124 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CNIH1O95406 144 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 HPRT1P00492 218 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 GCGP01275 180 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms